Strain Fitness in Escherichia coli BW25113 around b3082

Experiment: Ying_sugar7 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 1
3,230,922	+	fadH	b3081	0.61	-0.1
3,230,928	-	fadH	b3081	0.61	+0.3
3,231,019	+	fadH	b3081	0.66	+0.5
3,231,139	+	fadH	b3081	0.72	-0.4
3,231,163	-	fadH	b3081	0.73	+0.2
3,231,199	-	fadH	b3081	0.75	-0.2
3,231,267	+	fadH	b3081	0.78	-1.6
3,231,267	+	fadH	b3081	0.78	+0.4
3,231,356	+	fadH	b3081	0.83	+0.1
3,231,399	-	fadH	b3081	0.85	+0.1
3,231,427	-	fadH	b3081	0.86	+0.4
3,231,428	+	fadH	b3081	0.86	-0.2
3,231,428	+	fadH	b3081	0.86	-0.2
3,231,428	+	fadH	b3081	0.86	-0.1
3,231,428	+	fadH	b3081	0.86	-0.5
3,231,504	-				+0.8
3,231,530	+				-0.6
3,231,530	+				-0.0
3,231,547	+				+0.6
3,231,552	+				-0.8
3,231,643	+				-0.9
3,231,673	+				-0.3
3,231,812	-	ygjM	b3082	0.15	-0.4
3,231,855	-	ygjM	b3082	0.25	-0.6
3,231,856	-	ygjM	b3082	0.25	-0.6
3,231,892	-	ygjM	b3082	0.34	+1.0
3,231,892	-	ygjM	b3082	0.34	-0.6
3,232,179	+				-0.5
3,232,179	+				-0.2
3,232,181	+				+1.4
3,232,186	+				+0.2
3,232,189	-				-0.9
3,232,233	+	ygjN	b3083	0.22	+0.0
3,232,267	+	ygjN	b3083	0.33	-0.1
3,232,272	-	ygjN	b3083	0.35	-0.1
3,232,302	+	ygjN	b3083	0.44	-0.1
3,232,394	+	ygjN	b3083	0.73	+0.3
3,232,416	+	ygjN	b3083	0.80	-0.9
3,232,465	-				+0.1
3,232,465	-				-0.4
3,232,465	-				+0.3
3,232,471	+				-1.4
3,232,603	+				+0.1
3,232,603	+				-0.3
3,232,704	-				-0.5
3,232,704	-				-0.3
3,232,783	+				-0.9
3,232,783	+				+0.1
3,232,815	+				+0.2
3,232,830	-				-0.1
3,232,862	+				-0.4
3,232,862	+				-0.0
3,232,924	-	ygjO	b3084	0.14	-0.3
3,232,967	-	ygjO	b3084	0.18	+0.1
3,232,979	-	ygjO	b3084	0.19	-0.0
3,232,979	-	ygjO	b3084	0.19	+0.5
3,232,999	-	ygjO	b3084	0.21	+0.0
3,232,999	-	ygjO	b3084	0.21	+0.3