Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS17650

Experiment: Pullulan (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS17645 and ABZR88_RS17650 are separated by 8 nucleotidesABZR88_RS17650 and ABZR88_RS17655 overlap by 4 nucleotidesABZR88_RS17655 and ABZR88_RS17660 are separated by 314 nucleotides ABZR88_RS17645: ABZR88_RS17645 - hypothetical protein, at 4,315,484 to 4,316,638 _RS17645 ABZR88_RS17650: ABZR88_RS17650 - glycosyltransferase, at 4,316,647 to 4,317,753 _RS17650 ABZR88_RS17655: ABZR88_RS17655 - DapH/DapD/GlmU-related protein, at 4,317,750 to 4,317,965 _RS17655 ABZR88_RS17660: ABZR88_RS17660 - glycosyltransferase, at 4,318,280 to 4,319,407 _RS17660 Position (kb) 4316 4317 4318Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 4315.681 kb on + strand, within ABZR88_RS17645at 4315.703 kb on + strand, within ABZR88_RS17645at 4315.969 kb on + strand, within ABZR88_RS17645at 4316.005 kb on + strand, within ABZR88_RS17645at 4316.130 kb on + strand, within ABZR88_RS17645at 4316.225 kb on - strand, within ABZR88_RS17645at 4316.225 kb on - strand, within ABZR88_RS17645at 4316.226 kb on + strand, within ABZR88_RS17645at 4316.231 kb on + strand, within ABZR88_RS17645at 4316.487 kb on + strand, within ABZR88_RS17645at 4316.526 kb on + strandat 4316.527 kb on - strandat 4316.580 kb on - strandat 4316.671 kb on + strandat 4316.675 kb on - strandat 4316.717 kb on + strandat 4316.717 kb on + strandat 4316.882 kb on - strand, within ABZR88_RS17650at 4316.939 kb on - strand, within ABZR88_RS17650at 4317.075 kb on - strand, within ABZR88_RS17650at 4317.075 kb on - strand, within ABZR88_RS17650at 4317.247 kb on + strand, within ABZR88_RS17650at 4317.309 kb on - strand, within ABZR88_RS17650at 4317.370 kb on + strand, within ABZR88_RS17650at 4317.508 kb on + strand, within ABZR88_RS17650at 4317.530 kb on - strand, within ABZR88_RS17650at 4317.671 kb on - strandat 4317.781 kb on + strand, within ABZR88_RS17655at 4317.915 kb on - strand, within ABZR88_RS17655at 4318.034 kb on + strandat 4318.034 kb on + strandat 4318.250 kb on + strandat 4318.298 kb on + strandat 4318.395 kb on - strand, within ABZR88_RS17660at 4318.406 kb on + strand, within ABZR88_RS17660at 4318.407 kb on - strand, within ABZR88_RS17660at 4318.429 kb on + strand, within ABZR88_RS17660at 4318.506 kb on + strand, within ABZR88_RS17660at 4318.508 kb on + strand, within ABZR88_RS17660at 4318.538 kb on + strand, within ABZR88_RS17660at 4318.561 kb on - strand, within ABZR88_RS17660at 4318.561 kb on - strand, within ABZR88_RS17660at 4318.745 kb on - strand, within ABZR88_RS17660

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Per-strain Table

Position Strand Gene LocusTag Fraction Pullulan (C)
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4,315,681 + ABZR88_RS17645 0.17 -1.6
4,315,703 + ABZR88_RS17645 0.19 -4.2
4,315,969 + ABZR88_RS17645 0.42 -2.6
4,316,005 + ABZR88_RS17645 0.45 -1.4
4,316,130 + ABZR88_RS17645 0.56 -2.4
4,316,225 - ABZR88_RS17645 0.64 -1.8
4,316,225 - ABZR88_RS17645 0.64 -2.6
4,316,226 + ABZR88_RS17645 0.64 -2.7
4,316,231 + ABZR88_RS17645 0.65 -2.2
4,316,487 + ABZR88_RS17645 0.87 -3.5
4,316,526 + -1.7
4,316,527 - -0.9
4,316,580 - -2.7
4,316,671 + -1.5
4,316,675 - +0.1
4,316,717 + -1.2
4,316,717 + -1.4
4,316,882 - ABZR88_RS17650 0.21 -3.4
4,316,939 - ABZR88_RS17650 0.26 -2.7
4,317,075 - ABZR88_RS17650 0.39 -3.5
4,317,075 - ABZR88_RS17650 0.39 -2.4
4,317,247 + ABZR88_RS17650 0.54 -3.4
4,317,309 - ABZR88_RS17650 0.60 -3.0
4,317,370 + ABZR88_RS17650 0.65 -3.7
4,317,508 + ABZR88_RS17650 0.78 +1.1
4,317,530 - ABZR88_RS17650 0.80 -3.3
4,317,671 - -1.9
4,317,781 + ABZR88_RS17655 0.14 +0.2
4,317,915 - ABZR88_RS17655 0.76 -0.0
4,318,034 + -1.2
4,318,034 + -1.3
4,318,250 + +0.7
4,318,298 + -1.0
4,318,395 - ABZR88_RS17660 0.10 -2.4
4,318,406 + ABZR88_RS17660 0.11 -2.9
4,318,407 - ABZR88_RS17660 0.11 -2.4
4,318,429 + ABZR88_RS17660 0.13 -1.4
4,318,506 + ABZR88_RS17660 0.20 +0.1
4,318,508 + ABZR88_RS17660 0.20 -2.0
4,318,538 + ABZR88_RS17660 0.23 -1.7
4,318,561 - ABZR88_RS17660 0.25 -2.4
4,318,561 - ABZR88_RS17660 0.25 -2.2
4,318,745 - ABZR88_RS17660 0.41 +0.1

Or see this region's nucleotide sequence