Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS17515

Experiment: Pullulan (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS17510 and ABZR88_RS17515 are separated by 202 nucleotidesABZR88_RS17515 and ABZR88_RS17520 are separated by 457 nucleotides ABZR88_RS17510: ABZR88_RS17510 - WecB/TagA/CpsF family glycosyltransferase, at 4,283,186 to 4,283,929 _RS17510 ABZR88_RS17515: ABZR88_RS17515 - ChbG/HpnK family deacetylase, at 4,284,132 to 4,284,878 _RS17515 ABZR88_RS17520: ABZR88_RS17520 - polysaccharide biosynthesis/export family protein, at 4,285,336 to 4,286,124 _RS17520 Position (kb) 4284 4285Strain fitness (log2 ratio) -2 -1 0 1at 4283.185 kb on - strandat 4283.188 kb on - strandat 4283.210 kb on - strandat 4283.233 kb on - strandat 4283.251 kb on - strandat 4283.462 kb on + strand, within ABZR88_RS17510at 4283.466 kb on - strand, within ABZR88_RS17510at 4283.466 kb on - strand, within ABZR88_RS17510at 4283.670 kb on + strand, within ABZR88_RS17510at 4283.671 kb on - strand, within ABZR88_RS17510at 4283.741 kb on - strand, within ABZR88_RS17510at 4283.846 kb on - strand, within ABZR88_RS17510at 4284.012 kb on + strandat 4284.030 kb on - strandat 4284.114 kb on - strandat 4284.163 kb on + strandat 4284.374 kb on + strand, within ABZR88_RS17515at 4284.377 kb on + strand, within ABZR88_RS17515at 4284.417 kb on - strand, within ABZR88_RS17515at 4284.510 kb on - strand, within ABZR88_RS17515at 4284.527 kb on + strand, within ABZR88_RS17515at 4284.531 kb on + strand, within ABZR88_RS17515at 4284.779 kb on + strand, within ABZR88_RS17515at 4284.784 kb on + strand, within ABZR88_RS17515at 4284.807 kb on + strandat 4284.851 kb on + strandat 4284.859 kb on - strandat 4284.975 kb on + strandat 4284.976 kb on - strandat 4284.980 kb on - strandat 4285.102 kb on - strandat 4285.179 kb on + strandat 4285.186 kb on + strandat 4285.219 kb on + strandat 4285.371 kb on + strandat 4285.484 kb on + strand, within ABZR88_RS17520at 4285.591 kb on - strand, within ABZR88_RS17520at 4285.613 kb on + strand, within ABZR88_RS17520at 4285.650 kb on + strand, within ABZR88_RS17520at 4285.651 kb on - strand, within ABZR88_RS17520at 4285.651 kb on - strand, within ABZR88_RS17520at 4285.721 kb on + strand, within ABZR88_RS17520at 4285.861 kb on - strand, within ABZR88_RS17520

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Per-strain Table

Position Strand Gene LocusTag Fraction Pullulan (C)
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4,283,185 - -0.3
4,283,188 - +0.4
4,283,210 - +0.1
4,283,233 - -0.1
4,283,251 - -1.4
4,283,462 + ABZR88_RS17510 0.37 -0.6
4,283,466 - ABZR88_RS17510 0.38 -0.4
4,283,466 - ABZR88_RS17510 0.38 -0.9
4,283,670 + ABZR88_RS17510 0.65 -0.7
4,283,671 - ABZR88_RS17510 0.65 -1.4
4,283,741 - ABZR88_RS17510 0.75 -0.9
4,283,846 - ABZR88_RS17510 0.89 +0.7
4,284,012 + +0.2
4,284,030 - -0.3
4,284,114 - +1.5
4,284,163 + -1.1
4,284,374 + ABZR88_RS17515 0.32 -1.5
4,284,377 + ABZR88_RS17515 0.33 +0.1
4,284,417 - ABZR88_RS17515 0.38 -1.0
4,284,510 - ABZR88_RS17515 0.51 -0.7
4,284,527 + ABZR88_RS17515 0.53 +0.6
4,284,531 + ABZR88_RS17515 0.53 -0.7
4,284,779 + ABZR88_RS17515 0.87 -1.0
4,284,784 + ABZR88_RS17515 0.87 -0.3
4,284,807 + -0.5
4,284,851 + -0.2
4,284,859 - -0.3
4,284,975 + -0.3
4,284,976 - -0.1
4,284,980 - +0.6
4,285,102 - -1.0
4,285,179 + +0.4
4,285,186 + +0.6
4,285,219 + +1.1
4,285,371 + -0.1
4,285,484 + ABZR88_RS17520 0.19 -1.1
4,285,591 - ABZR88_RS17520 0.32 -0.5
4,285,613 + ABZR88_RS17520 0.35 -1.1
4,285,650 + ABZR88_RS17520 0.40 -1.9
4,285,651 - ABZR88_RS17520 0.40 -0.9
4,285,651 - ABZR88_RS17520 0.40 -0.8
4,285,721 + ABZR88_RS17520 0.49 -1.2
4,285,861 - ABZR88_RS17520 0.67 -0.8

Or see this region's nucleotide sequence