Experiment: Matrix:KB soft agar;Phage:inactivated cocktail;Temp:17;Samp:23-7
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_02120 and OLJFJH_02125 overlap by 14 nucleotides OLJFJH_02125 and OLJFJH_02130 overlap by 4 nucleotides OLJFJH_02130 and OLJFJH_02135 overlap by 4 nucleotides
OLJFJH_02120: OLJFJH_02120 - pyrroloquinoline quinone biosynthesis protein PqqE, at 374,058 to 375,206
_02120
OLJFJH_02125: OLJFJH_02125 - pyrroloquinoline quinone biosynthesis peptide chaperone PqqD, at 375,193 to 375,474
_02125
OLJFJH_02130: OLJFJH_02130 - pyrroloquinoline-quinone synthase PqqC, at 375,471 to 376,226
_02130
OLJFJH_02135: OLJFJH_02135 - pyrroloquinoline quinone biosynthesis protein PqqB, at 376,223 to 377,134
_02135
Position (kb) 375
376 Strain fitness (log2 ratio) -1
0
1 at 374.234 kb on + strand, within OLJFJH_02120 at 374.495 kb on - strand, within OLJFJH_02120 at 374.495 kb on - strand, within OLJFJH_02120 at 374.498 kb on - strand, within OLJFJH_02120 at 374.498 kb on - strand, within OLJFJH_02120 at 374.867 kb on + strand, within OLJFJH_02120 at 374.868 kb on - strand, within OLJFJH_02120 at 374.944 kb on + strand, within OLJFJH_02120 at 374.945 kb on - strand, within OLJFJH_02120 at 374.945 kb on - strand, within OLJFJH_02120 at 375.149 kb on - strand at 375.310 kb on - strand, within OLJFJH_02125 at 375.521 kb on - strand at 375.539 kb on + strand at 375.539 kb on + strand at 375.539 kb on + strand at 375.540 kb on - strand at 375.541 kb on + strand at 375.542 kb on - strand at 375.578 kb on + strand, within OLJFJH_02130 at 375.608 kb on + strand, within OLJFJH_02130 at 375.609 kb on - strand, within OLJFJH_02130 at 375.609 kb on - strand, within OLJFJH_02130 at 375.609 kb on - strand, within OLJFJH_02130 at 375.654 kb on + strand, within OLJFJH_02130 at 375.655 kb on - strand, within OLJFJH_02130 at 375.781 kb on + strand, within OLJFJH_02130 at 375.781 kb on + strand, within OLJFJH_02130 at 375.781 kb on + strand, within OLJFJH_02130 at 375.800 kb on + strand, within OLJFJH_02130 at 375.845 kb on - strand, within OLJFJH_02130 at 375.987 kb on - strand, within OLJFJH_02130 at 376.001 kb on + strand, within OLJFJH_02130 at 376.058 kb on + strand, within OLJFJH_02130 at 376.072 kb on + strand, within OLJFJH_02130 at 376.072 kb on + strand, within OLJFJH_02130 at 376.154 kb on + strand at 376.154 kb on + strand at 376.154 kb on + strand at 376.155 kb on - strand at 376.159 kb on + strand at 376.159 kb on + strand at 376.163 kb on - strand at 376.226 kb on + strand at 376.226 kb on + strand at 376.227 kb on - strand at 376.227 kb on - strand at 376.227 kb on - strand at 376.232 kb on + strand at 376.232 kb on + strand at 376.233 kb on - strand at 376.233 kb on - strand at 376.233 kb on - strand at 376.315 kb on + strand, within OLJFJH_02135 at 376.321 kb on + strand, within OLJFJH_02135 at 376.322 kb on - strand, within OLJFJH_02135 at 376.325 kb on - strand, within OLJFJH_02135
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:KB soft agar;Phage:inactivated cocktail;Temp:17;Samp:23-7 remove 374,234 + OLJFJH_02120 0.15 -0.9 374,495 - OLJFJH_02120 0.38 -0.7 374,495 - OLJFJH_02120 0.38 +0.2 374,498 - OLJFJH_02120 0.38 -0.5 374,498 - OLJFJH_02120 0.38 +0.4 374,867 + OLJFJH_02120 0.70 +0.6 374,868 - OLJFJH_02120 0.70 -1.1 374,944 + OLJFJH_02120 0.77 -0.2 374,945 - OLJFJH_02120 0.77 +0.4 374,945 - OLJFJH_02120 0.77 +0.1 375,149 - -0.1 375,310 - OLJFJH_02125 0.41 -1.0 375,521 - -0.9 375,539 + -0.8 375,539 + +0.3 375,539 + -0.6 375,540 - -0.3 375,541 + +0.0 375,542 - +0.2 375,578 + OLJFJH_02130 0.14 -0.2 375,608 + OLJFJH_02130 0.18 +0.3 375,609 - OLJFJH_02130 0.18 -0.5 375,609 - OLJFJH_02130 0.18 +0.5 375,609 - OLJFJH_02130 0.18 -0.2 375,654 + OLJFJH_02130 0.24 +0.0 375,655 - OLJFJH_02130 0.24 +0.2 375,781 + OLJFJH_02130 0.41 +0.5 375,781 + OLJFJH_02130 0.41 -0.6 375,781 + OLJFJH_02130 0.41 -0.4 375,800 + OLJFJH_02130 0.44 -0.3 375,845 - OLJFJH_02130 0.49 -0.0 375,987 - OLJFJH_02130 0.68 +0.9 376,001 + OLJFJH_02130 0.70 +0.1 376,058 + OLJFJH_02130 0.78 -0.6 376,072 + OLJFJH_02130 0.79 -0.9 376,072 + OLJFJH_02130 0.79 -0.4 376,154 + -1.0 376,154 + -0.1 376,154 + +0.3 376,155 - +0.2 376,159 + +0.5 376,159 + +0.0 376,163 - +0.1 376,226 + +0.3 376,226 + +0.1 376,227 - +1.3 376,227 - +0.6 376,227 - -0.7 376,232 + +0.3 376,232 + +0.2 376,233 - +0.1 376,233 - -0.9 376,233 - +0.3 376,315 + OLJFJH_02135 0.10 -1.3 376,321 + OLJFJH_02135 0.11 -0.2 376,322 - OLJFJH_02135 0.11 -0.1 376,325 - OLJFJH_02135 0.11 +0.2
Or see this region's nucleotide sequence