Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS10845

Experiment: D-Glucose-6-Phosphate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS10840 and BWI76_RS10845 are separated by 122 nucleotidesBWI76_RS10845 and BWI76_RS10850 overlap by 4 nucleotides BWI76_RS10840: BWI76_RS10840 - membrane protein, at 2,290,506 to 2,291,294 _RS10840 BWI76_RS10845: BWI76_RS10845 - DNA-binding response regulator, at 2,291,417 to 2,292,112 _RS10845 BWI76_RS10850: BWI76_RS10850 - two-component sensor histidine kinase, at 2,292,109 to 2,293,305 _RS10850 Position (kb) 2291 2292 2293Strain fitness (log2 ratio) -1 0 1at 2290.566 kb on + strandat 2290.618 kb on - strand, within BWI76_RS10840at 2290.642 kb on + strand, within BWI76_RS10840at 2290.642 kb on + strand, within BWI76_RS10840at 2290.652 kb on + strand, within BWI76_RS10840at 2290.846 kb on + strand, within BWI76_RS10840at 2291.271 kb on - strandat 2291.536 kb on + strand, within BWI76_RS10845at 2291.544 kb on - strand, within BWI76_RS10845at 2291.617 kb on - strand, within BWI76_RS10845at 2291.719 kb on + strand, within BWI76_RS10845at 2291.720 kb on + strand, within BWI76_RS10845at 2292.001 kb on - strand, within BWI76_RS10845at 2292.097 kb on - strandat 2292.325 kb on + strand, within BWI76_RS10850at 2292.438 kb on + strand, within BWI76_RS10850at 2292.729 kb on + strand, within BWI76_RS10850at 2292.958 kb on + strand, within BWI76_RS10850

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C)
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2,290,566 + +0.6
2,290,618 - BWI76_RS10840 0.14 +0.4
2,290,642 + BWI76_RS10840 0.17 +0.6
2,290,642 + BWI76_RS10840 0.17 +0.5
2,290,652 + BWI76_RS10840 0.19 -1.0
2,290,846 + BWI76_RS10840 0.43 +1.0
2,291,271 - -0.3
2,291,536 + BWI76_RS10845 0.17 +0.6
2,291,544 - BWI76_RS10845 0.18 +0.3
2,291,617 - BWI76_RS10845 0.29 +0.1
2,291,719 + BWI76_RS10845 0.43 +0.8
2,291,720 + BWI76_RS10845 0.44 +0.2
2,292,001 - BWI76_RS10845 0.84 +0.7
2,292,097 - +0.1
2,292,325 + BWI76_RS10850 0.18 -0.1
2,292,438 + BWI76_RS10850 0.27 -0.1
2,292,729 + BWI76_RS10850 0.52 -0.3
2,292,958 + BWI76_RS10850 0.71 +0.7

Or see this region's nucleotide sequence