Experiment: D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06975 and BWI76_RS06980 are separated by 210 nucleotides BWI76_RS06980 and BWI76_RS06985 are separated by 91 nucleotides BWI76_RS06985 and BWI76_RS06990 are separated by 88 nucleotides
BWI76_RS06975: BWI76_RS06975 - DNA-binding transcriptional activator AllS, at 1,465,061 to 1,465,984
_RS06975
BWI76_RS06980: BWI76_RS06980 - ureidoglycolate lyase, at 1,466,195 to 1,466,677
_RS06980
BWI76_RS06985: BWI76_RS06985 - transcriptional regulator, at 1,466,769 to 1,467,587
_RS06985
BWI76_RS06990: BWI76_RS06990 - glyoxylate carboligase, at 1,467,676 to 1,469,457
_RS06990
Position (kb)
1466
1467 Strain fitness (log2 ratio)
-1
0
1 at 1465.208 kb on - strand, within BWI76_RS06975 at 1465.347 kb on + strand, within BWI76_RS06975 at 1465.372 kb on + strand, within BWI76_RS06975 at 1465.542 kb on - strand, within BWI76_RS06975 at 1465.646 kb on + strand, within BWI76_RS06975 at 1465.925 kb on + strand at 1465.928 kb on - strand at 1466.133 kb on + strand at 1466.152 kb on + strand at 1466.153 kb on - strand at 1466.499 kb on + strand, within BWI76_RS06980 at 1466.835 kb on + strand at 1466.978 kb on - strand, within BWI76_RS06985 at 1467.603 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Ribose (C) remove 1,465,208 - BWI76_RS06975 0.16 -0.2 1,465,347 + BWI76_RS06975 0.31 +0.2 1,465,372 + BWI76_RS06975 0.34 +0.7 1,465,542 - BWI76_RS06975 0.52 +0.2 1,465,646 + BWI76_RS06975 0.63 +0.1 1,465,925 + -0.2 1,465,928 - -0.0 1,466,133 + -0.9 1,466,152 + -0.9 1,466,153 - +0.2 1,466,499 + BWI76_RS06980 0.63 +0.5 1,466,835 + +0.7 1,466,978 - BWI76_RS06985 0.26 -0.0 1,467,603 + +0.1
Or see this region's nucleotide sequence