Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_06036

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_06035 and H281DRAFT_06036 are separated by 300 nucleotidesH281DRAFT_06036 and H281DRAFT_06037 are separated by 97 nucleotidesH281DRAFT_06037 and H281DRAFT_06038 are separated by 51 nucleotides H281DRAFT_06035: H281DRAFT_06035 - esterase, PHB depolymerase family, at 39,397 to 40,587 _06035 H281DRAFT_06036: H281DRAFT_06036 - Membrane-associated phospholipid phosphatase, at 40,888 to 41,622 _06036 H281DRAFT_06037: H281DRAFT_06037 - molybdate transport system substrate-binding protein, at 41,720 to 42,526 _06037 H281DRAFT_06038: H281DRAFT_06038 - molybdate transport system permease protein, at 42,578 to 43,252 _06038 Position (kb) 40 41 42Strain fitness (log2 ratio) -2 -1 0 1at 39.983 kb on + strand, within H281DRAFT_06035at 39.984 kb on - strand, within H281DRAFT_06035at 39.984 kb on - strand, within H281DRAFT_06035at 39.984 kb on - strand, within H281DRAFT_06035at 40.177 kb on - strand, within H281DRAFT_06035at 40.265 kb on + strand, within H281DRAFT_06035at 40.265 kb on + strand, within H281DRAFT_06035at 40.740 kb on + strandat 40.768 kb on + strandat 40.825 kb on + strandat 40.826 kb on - strandat 40.826 kb on - strandat 40.826 kb on - strandat 40.827 kb on + strandat 40.827 kb on + strandat 40.827 kb on + strandat 40.827 kb on + strandat 40.828 kb on - strandat 40.828 kb on - strandat 40.830 kb on + strandat 40.830 kb on + strandat 40.830 kb on + strandat 40.883 kb on + strandat 40.883 kb on + strandat 40.883 kb on + strandat 40.883 kb on + strandat 40.884 kb on - strandat 40.884 kb on - strandat 40.884 kb on - strandat 40.884 kb on - strandat 40.884 kb on - strandat 40.948 kb on + strandat 40.949 kb on - strandat 41.027 kb on - strand, within H281DRAFT_06036at 41.120 kb on + strand, within H281DRAFT_06036at 41.183 kb on - strand, within H281DRAFT_06036at 41.695 kb on + strandat 41.697 kb on + strandat 41.701 kb on - strandat 41.956 kb on - strand, within H281DRAFT_06037at 42.170 kb on + strand, within H281DRAFT_06037at 42.293 kb on + strand, within H281DRAFT_06037at 42.542 kb on - strandat 42.542 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C)
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39,983 + H281DRAFT_06035 0.49 -2.4
39,984 - H281DRAFT_06035 0.49 -1.2
39,984 - H281DRAFT_06035 0.49 -1.0
39,984 - H281DRAFT_06035 0.49 +0.1
40,177 - H281DRAFT_06035 0.65 +0.7
40,265 + H281DRAFT_06035 0.73 +0.5
40,265 + H281DRAFT_06035 0.73 -1.4
40,740 + -0.3
40,768 + -0.7
40,825 + +0.0
40,826 - -0.9
40,826 - -0.9
40,826 - -1.4
40,827 + +0.2
40,827 + +0.8
40,827 + -0.5
40,827 + -1.9
40,828 - +0.0
40,828 - -0.0
40,830 + -0.4
40,830 + -0.9
40,830 + -0.4
40,883 + +1.3
40,883 + -1.5
40,883 + +0.1
40,883 + +0.1
40,884 - +1.1
40,884 - -0.4
40,884 - -0.4
40,884 - +0.3
40,884 - +0.1
40,948 + +0.2
40,949 - +0.2
41,027 - H281DRAFT_06036 0.19 +1.1
41,120 + H281DRAFT_06036 0.32 +0.0
41,183 - H281DRAFT_06036 0.40 +0.3
41,695 + +0.9
41,697 + +0.0
41,701 - +0.3
41,956 - H281DRAFT_06037 0.29 -0.2
42,170 + H281DRAFT_06037 0.56 +0.4
42,293 + H281DRAFT_06037 0.71 -0.3
42,542 - +0.5
42,542 - -0.6

Or see this region's nucleotide sequence