Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02657 and H281DRAFT_02658 are separated by 28 nucleotides H281DRAFT_02658 and H281DRAFT_02659 are separated by 115 nucleotides H281DRAFT_02659 and H281DRAFT_02660 are separated by 123 nucleotides
H281DRAFT_02657: H281DRAFT_02657 - cyanate lyase, at 237,893 to 238,363
_02657
H281DRAFT_02658: H281DRAFT_02658 - carbonic anhydrase, at 238,392 to 239,051
_02658
H281DRAFT_02659: H281DRAFT_02659 - LysR family transcriptional regulator, cyn operon transcriptional activator, at 239,167 to 240,051
_02659
H281DRAFT_02660: H281DRAFT_02660 - formamidase, at 240,175 to 241,206
_02660
Position (kb) 239
240
241 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 238.508 kb on - strand, within H281DRAFT_02658 at 238.805 kb on - strand, within H281DRAFT_02658 at 238.944 kb on - strand, within H281DRAFT_02658 at 239.111 kb on - strand at 239.294 kb on + strand, within H281DRAFT_02659 at 240.050 kb on - strand at 240.151 kb on + strand at 240.347 kb on - strand, within H281DRAFT_02660 at 240.449 kb on - strand, within H281DRAFT_02660 at 240.544 kb on + strand, within H281DRAFT_02660 at 240.584 kb on - strand, within H281DRAFT_02660 at 240.590 kb on - strand, within H281DRAFT_02660 at 240.590 kb on - strand, within H281DRAFT_02660 at 240.590 kb on - strand, within H281DRAFT_02660 at 240.833 kb on + strand, within H281DRAFT_02660 at 240.834 kb on - strand, within H281DRAFT_02660 at 240.976 kb on + strand, within H281DRAFT_02660
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 238,508 - H281DRAFT_02658 0.18 -0.2 238,805 - H281DRAFT_02658 0.63 +1.4 238,944 - H281DRAFT_02658 0.84 -0.1 239,111 - -0.5 239,294 + H281DRAFT_02659 0.14 +0.4 240,050 - -4.1 240,151 + +0.8 240,347 - H281DRAFT_02660 0.17 +1.0 240,449 - H281DRAFT_02660 0.27 -0.7 240,544 + H281DRAFT_02660 0.36 -0.1 240,584 - H281DRAFT_02660 0.40 -0.0 240,590 - H281DRAFT_02660 0.40 -0.6 240,590 - H281DRAFT_02660 0.40 -0.6 240,590 - H281DRAFT_02660 0.40 -1.2 240,833 + H281DRAFT_02660 0.64 -1.1 240,834 - H281DRAFT_02660 0.64 +0.1 240,976 + H281DRAFT_02660 0.78 +0.5
Or see this region's nucleotide sequence