Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06067 and H281DRAFT_06068 are separated by 52 nucleotides H281DRAFT_06068 and H281DRAFT_06069 overlap by 11 nucleotides H281DRAFT_06069 and H281DRAFT_06070 overlap by 4 nucleotides
H281DRAFT_06067: H281DRAFT_06067 - tryptophan synthase, beta chain, at 81,733 to 82,926
_06067
H281DRAFT_06068: H281DRAFT_06068 - phosphoribosylanthranilate isomerase, at 82,979 to 83,704
_06068
H281DRAFT_06069: H281DRAFT_06069 - tRNA pseudouridine38-40 synthase, at 83,694 to 84,512
_06069
H281DRAFT_06070: H281DRAFT_06070 - FimV C-terminal domain-containing protein, at 84,509 to 86,827
_06070
Position (kb) 82
83
84 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 82.002 kb on - strand, within H281DRAFT_06067 at 82.064 kb on + strand, within H281DRAFT_06067 at 82.064 kb on + strand, within H281DRAFT_06067 at 82.065 kb on - strand, within H281DRAFT_06067 at 82.065 kb on - strand, within H281DRAFT_06067 at 82.068 kb on + strand, within H281DRAFT_06067 at 82.068 kb on + strand, within H281DRAFT_06067 at 82.068 kb on + strand, within H281DRAFT_06067 at 82.069 kb on - strand, within H281DRAFT_06067 at 82.069 kb on - strand, within H281DRAFT_06067 at 82.207 kb on - strand, within H281DRAFT_06067 at 82.360 kb on - strand, within H281DRAFT_06067 at 82.361 kb on + strand, within H281DRAFT_06067 at 82.361 kb on + strand, within H281DRAFT_06067 at 82.361 kb on + strand, within H281DRAFT_06067 at 82.361 kb on + strand, within H281DRAFT_06067 at 82.362 kb on - strand, within H281DRAFT_06067 at 82.362 kb on - strand, within H281DRAFT_06067 at 82.362 kb on - strand, within H281DRAFT_06067 at 82.362 kb on - strand, within H281DRAFT_06067 at 82.362 kb on - strand, within H281DRAFT_06067 at 82.362 kb on - strand, within H281DRAFT_06067 at 82.362 kb on - strand, within H281DRAFT_06067 at 82.520 kb on + strand, within H281DRAFT_06067 at 82.520 kb on + strand, within H281DRAFT_06067 at 82.520 kb on + strand, within H281DRAFT_06067 at 82.520 kb on + strand, within H281DRAFT_06067 at 82.521 kb on - strand, within H281DRAFT_06067 at 82.521 kb on - strand, within H281DRAFT_06067 at 82.659 kb on + strand, within H281DRAFT_06067 at 82.660 kb on - strand, within H281DRAFT_06067 at 82.769 kb on + strand, within H281DRAFT_06067 at 82.787 kb on + strand, within H281DRAFT_06067 at 82.838 kb on - strand at 82.838 kb on - strand at 82.939 kb on + strand at 82.940 kb on - strand at 83.057 kb on + strand at 83.057 kb on + strand, within H281DRAFT_06068 at 83.176 kb on + strand, within H281DRAFT_06068 at 83.177 kb on - strand, within H281DRAFT_06068 at 83.257 kb on - strand, within H281DRAFT_06068 at 83.273 kb on + strand, within H281DRAFT_06068 at 83.571 kb on - strand, within H281DRAFT_06068 at 83.724 kb on + strand at 83.725 kb on - strand at 83.730 kb on - strand at 83.800 kb on + strand, within H281DRAFT_06069 at 83.801 kb on - strand, within H281DRAFT_06069 at 83.900 kb on - strand at 84.103 kb on - strand, within H281DRAFT_06069 at 84.178 kb on + strand, within H281DRAFT_06069 at 84.179 kb on - strand, within H281DRAFT_06069 at 84.179 kb on - strand, within H281DRAFT_06069 at 84.184 kb on + strand, within H281DRAFT_06069 at 84.185 kb on - strand at 84.185 kb on - strand, within H281DRAFT_06069 at 84.185 kb on - strand, within H281DRAFT_06069 at 84.185 kb on - strand, within H281DRAFT_06069 at 84.185 kb on - strand, within H281DRAFT_06069 at 84.485 kb on - strand at 84.631 kb on - strand at 84.631 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 82,002 - H281DRAFT_06067 0.23 -2.6 82,064 + H281DRAFT_06067 0.28 -3.6 82,064 + H281DRAFT_06067 0.28 -4.1 82,065 - H281DRAFT_06067 0.28 -2.2 82,065 - H281DRAFT_06067 0.28 -1.6 82,068 + H281DRAFT_06067 0.28 -2.4 82,068 + H281DRAFT_06067 0.28 -3.0 82,068 + H281DRAFT_06067 0.28 -4.8 82,069 - H281DRAFT_06067 0.28 -1.6 82,069 - H281DRAFT_06067 0.28 -3.3 82,207 - H281DRAFT_06067 0.40 -5.6 82,360 - H281DRAFT_06067 0.53 -4.1 82,361 + H281DRAFT_06067 0.53 -3.0 82,361 + H281DRAFT_06067 0.53 -3.7 82,361 + H281DRAFT_06067 0.53 -4.5 82,361 + H281DRAFT_06067 0.53 -0.0 82,362 - H281DRAFT_06067 0.53 -3.9 82,362 - H281DRAFT_06067 0.53 -2.2 82,362 - H281DRAFT_06067 0.53 -4.3 82,362 - H281DRAFT_06067 0.53 -4.2 82,362 - H281DRAFT_06067 0.53 -3.4 82,362 - H281DRAFT_06067 0.53 -4.6 82,362 - H281DRAFT_06067 0.53 -3.8 82,520 + H281DRAFT_06067 0.66 -5.2 82,520 + H281DRAFT_06067 0.66 -4.2 82,520 + H281DRAFT_06067 0.66 -3.6 82,520 + H281DRAFT_06067 0.66 -4.3 82,521 - H281DRAFT_06067 0.66 -3.3 82,521 - H281DRAFT_06067 0.66 -2.8 82,659 + H281DRAFT_06067 0.78 -2.7 82,660 - H281DRAFT_06067 0.78 -2.2 82,769 + H281DRAFT_06067 0.87 -5.3 82,787 + H281DRAFT_06067 0.88 -4.2 82,838 - -4.8 82,838 - -2.2 82,939 + -0.6 82,940 - -0.5 83,057 + +1.0 83,057 + H281DRAFT_06068 0.11 -1.5 83,176 + H281DRAFT_06068 0.27 -1.5 83,177 - H281DRAFT_06068 0.27 -3.6 83,257 - H281DRAFT_06068 0.38 -4.7 83,273 + H281DRAFT_06068 0.40 -3.4 83,571 - H281DRAFT_06068 0.82 -5.1 83,724 + +0.3 83,725 - -0.6 83,730 - +0.3 83,800 + H281DRAFT_06069 0.13 +1.3 83,801 - H281DRAFT_06069 0.13 +0.4 83,900 - +1.0 84,103 - H281DRAFT_06069 0.50 +0.8 84,178 + H281DRAFT_06069 0.59 +2.6 84,179 - H281DRAFT_06069 0.59 +0.4 84,179 - H281DRAFT_06069 0.59 -0.3 84,184 + H281DRAFT_06069 0.60 +1.9 84,185 - -0.3 84,185 - H281DRAFT_06069 0.60 +1.6 84,185 - H281DRAFT_06069 0.60 +0.2 84,185 - H281DRAFT_06069 0.60 +0.9 84,185 - H281DRAFT_06069 0.60 +2.7 84,485 - +0.6 84,631 - -0.2 84,631 - +0.1
Or see this region's nucleotide sequence