Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04354 and H281DRAFT_04355 are separated by 115 nucleotides H281DRAFT_04355 and H281DRAFT_04356 are separated by 83 nucleotides H281DRAFT_04356 and H281DRAFT_04357 are separated by 4 nucleotides
H281DRAFT_04354: H281DRAFT_04354 - hypothetical protein, at 71,545 to 71,928
_04354
H281DRAFT_04355: H281DRAFT_04355 - RNA polymerase, sigma-24 subunit, RpoE, at 72,044 to 72,643
_04355
H281DRAFT_04356: H281DRAFT_04356 - anti sigma-E protein, RseA, at 72,727 to 73,341
_04356
H281DRAFT_04357: H281DRAFT_04357 - sigma E regulatory protein, MucB/RseB, at 73,346 to 74,389
_04357
Position (kb) 72
73
74 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 71.932 kb on + strand at 71.941 kb on + strand at 71.973 kb on - strand at 71.998 kb on - strand at 71.998 kb on - strand at 71.998 kb on - strand at 72.677 kb on + strand at 72.677 kb on + strand at 72.686 kb on + strand at 72.686 kb on + strand at 72.711 kb on + strand at 72.711 kb on + strand at 72.711 kb on + strand at 72.712 kb on - strand at 72.712 kb on - strand at 72.878 kb on - strand, within H281DRAFT_04356 at 73.084 kb on - strand, within H281DRAFT_04356 at 73.247 kb on - strand, within H281DRAFT_04356 at 73.339 kb on + strand at 73.339 kb on + strand at 73.340 kb on - strand at 73.340 kb on - strand at 73.369 kb on - strand at 73.369 kb on - strand at 73.376 kb on - strand at 73.429 kb on + strand at 73.547 kb on + strand, within H281DRAFT_04357 at 73.589 kb on + strand, within H281DRAFT_04357 at 73.678 kb on + strand, within H281DRAFT_04357 at 73.678 kb on + strand, within H281DRAFT_04357 at 73.781 kb on + strand, within H281DRAFT_04357 at 73.781 kb on + strand, within H281DRAFT_04357 at 73.872 kb on - strand, within H281DRAFT_04357 at 74.012 kb on - strand, within H281DRAFT_04357 at 74.283 kb on + strand, within H281DRAFT_04357 at 74.283 kb on + strand, within H281DRAFT_04357 at 74.283 kb on + strand, within H281DRAFT_04357 at 74.283 kb on + strand, within H281DRAFT_04357 at 74.284 kb on - strand, within H281DRAFT_04357 at 74.284 kb on - strand, within H281DRAFT_04357 at 74.284 kb on - strand, within H281DRAFT_04357 at 74.286 kb on + strand at 74.315 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 71,932 + -0.1 71,941 + +0.6 71,973 - -0.5 71,998 - -0.7 71,998 - -1.1 71,998 - -0.8 72,677 + +0.1 72,677 + +1.9 72,686 + +0.1 72,686 + -0.8 72,711 + +4.1 72,711 + +0.1 72,711 + +0.5 72,712 - -0.1 72,712 - -0.7 72,878 - H281DRAFT_04356 0.25 +1.9 73,084 - H281DRAFT_04356 0.58 -1.1 73,247 - H281DRAFT_04356 0.85 -0.8 73,339 + +0.4 73,339 + +0.6 73,340 - +0.2 73,340 - -0.6 73,369 - -0.9 73,369 - -0.1 73,376 - -0.9 73,429 + -0.8 73,547 + H281DRAFT_04357 0.19 -0.9 73,589 + H281DRAFT_04357 0.23 -0.2 73,678 + H281DRAFT_04357 0.32 +1.9 73,678 + H281DRAFT_04357 0.32 -0.2 73,781 + H281DRAFT_04357 0.42 -1.0 73,781 + H281DRAFT_04357 0.42 -0.2 73,872 - H281DRAFT_04357 0.50 +0.9 74,012 - H281DRAFT_04357 0.64 +1.8 74,283 + H281DRAFT_04357 0.90 +0.5 74,283 + H281DRAFT_04357 0.90 -0.1 74,283 + H281DRAFT_04357 0.90 -1.0 74,283 + H281DRAFT_04357 0.90 -1.7 74,284 - H281DRAFT_04357 0.90 -0.9 74,284 - H281DRAFT_04357 0.90 +0.3 74,284 - H281DRAFT_04357 0.90 -1.9 74,286 + +0.2 74,315 - -0.1
Or see this region's nucleotide sequence