Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03069 and H281DRAFT_03070 overlap by 4 nucleotides H281DRAFT_03070 and H281DRAFT_03071 are separated by 7 nucleotides H281DRAFT_03071 and H281DRAFT_03072 overlap by 4 nucleotides H281DRAFT_03072 and H281DRAFT_03073 are separated by 107 nucleotides
H281DRAFT_03069: H281DRAFT_03069 - Uncharacterized conserved protein, at 100,180 to 100,551
_03069
H281DRAFT_03070: H281DRAFT_03070 - hypothetical protein, at 100,548 to 100,670
_03070
H281DRAFT_03071: H281DRAFT_03071 - two-component system, OmpR family, response regulator, at 100,678 to 101,418
_03071
H281DRAFT_03072: H281DRAFT_03072 - Signal transduction histidine kinase, at 101,415 to 102,758
_03072
H281DRAFT_03073: H281DRAFT_03073 - sulfane dehydrogenase subunit SoxC, at 102,866 to 104,143
_03073
Position (kb) 101
102
103 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 100.697 kb on + strand at 100.698 kb on - strand at 100.956 kb on - strand, within H281DRAFT_03071 at 101.348 kb on - strand at 101.424 kb on - strand at 101.858 kb on + strand, within H281DRAFT_03072 at 101.858 kb on + strand, within H281DRAFT_03072 at 101.859 kb on - strand, within H281DRAFT_03072 at 102.096 kb on + strand, within H281DRAFT_03072 at 102.096 kb on + strand, within H281DRAFT_03072 at 102.097 kb on - strand, within H281DRAFT_03072 at 102.319 kb on + strand, within H281DRAFT_03072 at 102.320 kb on - strand, within H281DRAFT_03072 at 102.342 kb on + strand, within H281DRAFT_03072 at 102.680 kb on + strand at 103.047 kb on - strand, within H281DRAFT_03073 at 103.371 kb on + strand at 103.372 kb on - strand, within H281DRAFT_03073 at 103.646 kb on - strand at 103.654 kb on + strand, within H281DRAFT_03073 at 103.655 kb on - strand, within H281DRAFT_03073
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 100,697 + -1.1 100,698 - -0.2 100,956 - H281DRAFT_03071 0.38 -0.1 101,348 - +0.8 101,424 - +0.9 101,858 + H281DRAFT_03072 0.33 -2.0 101,858 + H281DRAFT_03072 0.33 -3.3 101,859 - H281DRAFT_03072 0.33 -2.9 102,096 + H281DRAFT_03072 0.51 -0.8 102,096 + H281DRAFT_03072 0.51 -1.1 102,097 - H281DRAFT_03072 0.51 -2.4 102,319 + H281DRAFT_03072 0.67 +0.3 102,320 - H281DRAFT_03072 0.67 -0.5 102,342 + H281DRAFT_03072 0.69 -1.9 102,680 + -1.3 103,047 - H281DRAFT_03073 0.14 +0.5 103,371 + +0.1 103,372 - H281DRAFT_03073 0.40 -0.0 103,646 - -1.1 103,654 + H281DRAFT_03073 0.62 -0.5 103,655 - H281DRAFT_03073 0.62 -0.1
Or see this region's nucleotide sequence