Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3178

Experiment: L-Citrulline (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Citrulline (C)
3,559,012	+				-1.0
3,559,012	+				+2.0
3,559,012	+				-0.2
3,559,012	+				-1.0
3,559,013	-				-0.0
3,559,013	-				-0.0
3,559,013	-				-0.0
3,559,114	+				+0.4
3,559,114	+				-0.2
3,559,114	+				+3.3
3,559,114	+				-1.6
3,559,114	+				+0.4
3,559,115	-				-0.0
3,559,115	-				+2.0
3,559,127	-				-0.6
3,559,207	+		Pf1N1B4_3177	0.12	+2.3
3,559,207	+		Pf1N1B4_3177	0.12	+0.6
3,559,208	-		Pf1N1B4_3177	0.12	-2.8
3,559,281	+				-1.0
3,559,281	+		Pf1N1B4_3177	0.22	-2.3
3,559,348	+		Pf1N1B4_3177	0.31	+1.6
3,559,348	+		Pf1N1B4_3177	0.31	-0.8
3,559,348	+		Pf1N1B4_3177	0.31	-1.0
3,559,348	+		Pf1N1B4_3177	0.31	-0.0
3,559,348	+		Pf1N1B4_3177	0.31	-0.2
3,559,349	-		Pf1N1B4_3177	0.32	-1.0
3,559,349	-		Pf1N1B4_3177	0.32	-0.0
3,559,351	+		Pf1N1B4_3177	0.32	-1.2
3,559,351	+		Pf1N1B4_3177	0.32	+0.7
3,559,351	+		Pf1N1B4_3177	0.32	-1.6
3,559,351	+		Pf1N1B4_3177	0.32	+1.6
3,559,352	-		Pf1N1B4_3177	0.32	-3.2
3,559,390	+		Pf1N1B4_3177	0.37	-0.0
3,559,390	+		Pf1N1B4_3177	0.37	-2.0
3,559,391	-		Pf1N1B4_3177	0.37	-0.4
3,559,391	-		Pf1N1B4_3177	0.37	-0.4
3,559,397	-		Pf1N1B4_3177	0.38	-0.9
3,559,397	-		Pf1N1B4_3177	0.38	-0.1
3,559,420	+		Pf1N1B4_3177	0.41	+0.7
3,559,489	+		Pf1N1B4_3177	0.51	-1.0
3,559,489	+		Pf1N1B4_3177	0.51	-0.0
3,559,588	+		Pf1N1B4_3177	0.65	+0.6
3,559,588	+		Pf1N1B4_3177	0.65	-0.3
3,559,588	+		Pf1N1B4_3177	0.65	-1.0
3,559,589	-		Pf1N1B4_3177	0.65	-0.0
3,559,589	-		Pf1N1B4_3177	0.65	-0.0
3,559,600	+		Pf1N1B4_3177	0.67	-0.0
3,559,601	-		Pf1N1B4_3177	0.67	-1.0
3,559,620	-		Pf1N1B4_3177	0.70	-1.2
3,559,621	+		Pf1N1B4_3177	0.70	+1.0
3,559,621	+		Pf1N1B4_3177	0.70	-0.9
3,559,621	+		Pf1N1B4_3177	0.70	+0.7
3,559,621	+		Pf1N1B4_3177	0.70	-2.0
3,559,621	+		Pf1N1B4_3177	0.70	-1.0
3,559,621	+		Pf1N1B4_3177	0.70	+1.0
3,559,621	+		Pf1N1B4_3177	0.70	-1.0
3,559,621	+		Pf1N1B4_3177	0.70	+1.6
3,559,621	+		Pf1N1B4_3177	0.70	-0.4
3,559,622	-		Pf1N1B4_3177	0.70	-3.0
3,559,622	-		Pf1N1B4_3177	0.70	-1.0
3,559,622	-				+1.0
3,559,622	-		Pf1N1B4_3177	0.70	-2.3
3,559,622	-		Pf1N1B4_3177	0.70	-2.6
3,559,645	+		Pf1N1B4_3177	0.73	-1.3
3,559,645	+		Pf1N1B4_3177	0.73	+1.0
3,559,646	-		Pf1N1B4_3177	0.73	+1.0
3,559,646	-		Pf1N1B4_3177	0.73	-1.0
3,559,646	-		Pf1N1B4_3177	0.73	+0.4
3,559,646	-		Pf1N1B4_3177	0.73	-0.0
3,559,646	-		Pf1N1B4_3177	0.73	-0.3
3,559,651	+		Pf1N1B4_3177	0.74	+0.6
3,559,651	+		Pf1N1B4_3177	0.74	+2.0
3,559,651	+		Pf1N1B4_3177	0.74	-1.3
3,559,651	+		Pf1N1B4_3177	0.74	-1.6
3,559,651	+		Pf1N1B4_3177	0.74	-0.0
3,559,651	+		Pf1N1B4_3177	0.74	-0.3
3,559,652	-		Pf1N1B4_3177	0.74	-0.4
3,559,652	-		Pf1N1B4_3177	0.74	-1.6
3,559,652	-		Pf1N1B4_3177	0.74	+1.0
3,559,675	+		Pf1N1B4_3177	0.77	+1.0
3,559,675	+		Pf1N1B4_3177	0.77	-0.7
3,559,675	+		Pf1N1B4_3177	0.77	+0.7
3,559,675	+		Pf1N1B4_3177	0.77	+1.8
3,559,675	+		Pf1N1B4_3177	0.77	-0.8
3,559,676	-		Pf1N1B4_3177	0.77	-0.1
3,559,676	-		Pf1N1B4_3177	0.77	-0.0
3,559,676	-				+1.0
3,559,676	-		Pf1N1B4_3177	0.77	+0.7
3,559,783	+				+0.1
3,559,793	+				-0.2
3,559,794	-				+1.6
3,559,796	-				-0.8
3,559,796	-				+1.6
3,559,796	-				+1.0
3,559,813	+				+0.6
3,559,813	+				-0.0
3,559,945	-		Pf1N1B4_3178	0.16	-2.0
3,559,945	-		Pf1N1B4_3178	0.16	+1.6
3,559,956	+		Pf1N1B4_3178	0.17	-1.3
3,559,956	+		Pf1N1B4_3178	0.17	-0.7
3,559,956	+		Pf1N1B4_3178	0.17	-3.2
3,559,957	-		Pf1N1B4_3178	0.17	-1.0
3,559,957	-		Pf1N1B4_3178	0.17	-1.3
3,559,957	-				+1.6
3,560,131	-		Pf1N1B4_3178	0.41	-0.2
3,560,199	+		Pf1N1B4_3178	0.50	-0.3
3,560,199	+		Pf1N1B4_3178	0.50	+1.0
3,560,199	+				-0.0
3,560,199	+				-1.0
3,560,199	+		Pf1N1B4_3178	0.50	-1.0
3,560,200	-		Pf1N1B4_3178	0.50	+1.0
3,560,200	-		Pf1N1B4_3178	0.50	-1.0
3,560,208	+		Pf1N1B4_3178	0.52	-0.0
3,560,208	+		Pf1N1B4_3178	0.52	+1.6
3,560,208	+		Pf1N1B4_3178	0.52	-1.0
3,560,208	+		Pf1N1B4_3178	0.52	+0.3
3,560,209	-		Pf1N1B4_3178	0.52	-1.3
3,560,209	-		Pf1N1B4_3178	0.52	-0.0
3,560,259	+		Pf1N1B4_3178	0.59	+2.0
3,560,259	+		Pf1N1B4_3178	0.59	-1.1
3,560,259	+		Pf1N1B4_3178	0.59	+0.4
3,560,259	+		Pf1N1B4_3178	0.59	-1.6
3,560,260	-				-0.0
3,560,260	-		Pf1N1B4_3178	0.59	-0.0
3,560,260	-		Pf1N1B4_3178	0.59	-3.3
3,560,260	-		Pf1N1B4_3178	0.59	-1.3
3,560,260	-		Pf1N1B4_3178	0.59	-2.3
3,560,260	-		Pf1N1B4_3178	0.59	-2.3
3,560,311	-		Pf1N1B4_3178	0.66	-0.0
3,560,364	+		Pf1N1B4_3178	0.73	-0.8
3,560,364	+		Pf1N1B4_3178	0.73	-1.0
3,560,365	-		Pf1N1B4_3178	0.73	-1.0
3,560,365	-		Pf1N1B4_3178	0.73	-0.8
3,560,543	+				-3.2
3,560,543	+				-1.6
3,560,544	-				-0.0
3,560,546	+				-1.6
3,560,560	+				-1.0
3,560,561	-				+1.4
3,560,561	-				-0.2
3,560,561	-				-0.3
3,560,561	-				-1.3
3,560,561	-				-1.8
3,560,619	-				+0.6
3,560,619	-				-2.6
3,560,619	-				+1.3
3,560,619	-				-1.6
3,560,619	-				+0.2
3,560,673	-				-1.0
3,560,700	+				-0.6
3,560,700	+		Pf1N1B4_3179	0.11	-0.0
3,560,733	+		Pf1N1B4_3179	0.15	+0.6
3,560,734	-		Pf1N1B4_3179	0.15	-0.2
3,560,740	-		Pf1N1B4_3179	0.16	-0.0
3,560,740	-		Pf1N1B4_3179	0.16	-0.0
3,560,740	-		Pf1N1B4_3179	0.16	+1.2
3,560,745	+		Pf1N1B4_3179	0.16	-0.6
3,560,894	+		Pf1N1B4_3179	0.35	-1.6
3,560,895	-		Pf1N1B4_3179	0.36	-0.4
3,560,895	-		Pf1N1B4_3179	0.36	+0.3
3,560,895	-		Pf1N1B4_3179	0.36	-1.0
3,560,915	+		Pf1N1B4_3179	0.38	-0.5
3,560,929	+				-0.0
3,560,961	-		Pf1N1B4_3179	0.44	+0.6
3,560,961	-		Pf1N1B4_3179	0.44	-0.8
3,561,053	+		Pf1N1B4_3179	0.56	+1.0
3,561,053	+		Pf1N1B4_3179	0.56	+1.6
3,561,054	-		Pf1N1B4_3179	0.56	+0.6
3,561,054	-		Pf1N1B4_3179	0.56	-0.6
3,561,054	-		Pf1N1B4_3179	0.56	-0.0
3,561,253	+		Pf1N1B4_3179	0.81	+0.8
3,561,253	+		Pf1N1B4_3179	0.81	-1.0
3,561,326	+				-0.0
3,561,326	+				-0.3
3,561,327	-				+0.6
3,561,327	-				+0.3
3,561,327	-				+0.5
3,561,412	-				+1.0
3,561,421	+				+0.6
3,561,421	+				+0.7
3,561,422	-				+1.0
3,561,422	-				+1.6
3,561,444	+				-0.0
3,561,444	+				-1.1
3,561,444	+				+2.0
3,561,444	+				-0.8
3,561,444	+				-2.0
3,561,444	+				-0.6
3,561,444	+				-0.4
3,561,444	+				-0.3
3,561,445	-				+2.1
3,561,445	-				+2.3
3,561,445	-				+0.4
3,561,445	-				-0.0
3,561,445	-				+1.8
3,561,445	-				+2.1
3,561,445	-				+0.2
3,561,445	-				+0.6
3,561,445	-				+0.8
3,561,445	-				+1.0
3,561,445	-				+1.0
3,561,445	-				+0.8
3,561,445	-				+0.8
3,561,445	-				+0.4
3,561,445	-				+2.8
3,561,445	-				+1.9
3,561,445	-				+2.4
3,561,445	-				+0.9
3,561,445	-				+2.0
3,561,445	-				+3.4
3,561,445	-				+0.8
3,561,450	+				+0.6
3,561,451	-				-1.6
3,561,451	-				+1.4
3,561,462	+				+0.4
3,561,462	+				-0.6
3,561,463	-				+1.5
3,561,463	-				+0.2
3,561,463	-				+1.0
3,561,463	-				+0.3
3,561,463	-				+1.4
3,561,470	-				+1.2
3,561,470	-				+1.2
3,561,470	-				+0.6
3,561,470	-				+1.7
3,561,472	+				-2.0
3,561,473	-				+0.9
3,561,473	-				+0.8
3,561,473	-				+0.4
3,561,473	-				+1.2
3,561,479	-				+2.6
3,561,479	-				+0.3
3,561,513	+				+1.3
3,561,514	-				+0.2
3,561,514	-				+1.1
3,561,520	+				-1.0
3,561,521	-				+0.5
3,561,521	-				+2.4
3,561,523	+				-2.0
3,561,523	+				-1.0
3,561,523	+				-1.3
3,561,524	-				+0.4
3,561,524	-				+0.9
3,561,524	-				+0.2
3,561,524	-				+2.0
3,561,524	-				+0.7
3,561,524	-				+0.5
3,561,524	-				+1.4
3,561,524	-				+3.9
3,561,524	-				+0.2
3,561,524	-				+1.6
3,561,547	+				-2.8
3,561,548	-				+2.6