Strain Fitness in Pseudomonas simiae WCS417 around PS417_11075
Experiment: Phosphomycin 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Phosphomycin 0.002 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,372,867 | - | -0.3 | |||
| 2,372,873 | - | +0.4 | |||
| 2,373,194 | + | PS417_11070 | 0.35 | +0.1 | |
| 2,373,540 | + | PS417_11070 | 0.73 | +0.7 | |
| 2,373,541 | - | +1.6 | |||
| 2,373,541 | - | +1.0 | |||
| 2,373,676 | + | PS417_11070 | 0.87 | -0.6 | |
| 2,373,677 | - | PS417_11070 | 0.88 | +0.9 | |
| 2,373,677 | - | -0.7 | |||
| 2,373,781 | + | -0.7 | |||
| 2,373,807 | - | -0.1 | |||
| 2,373,807 | - | -0.0 | |||
| 2,373,812 | + | +0.1 | |||
| 2,373,814 | + | -0.7 | |||
| 2,374,055 | + | PS417_11075 | 0.31 | +0.6 | |
| 2,374,414 | - | PS417_11075 | 0.77 | +0.2 | |
| 2,374,415 | + | PS417_11075 | 0.77 | +2.6 | |
| 2,374,415 | + | PS417_11075 | 0.77 | -0.4 | |
| 2,374,415 | + | PS417_11075 | 0.77 | +0.6 | |
| 2,374,416 | - | PS417_11075 | 0.78 | +1.0 | |
| 2,374,522 | + | +0.1 | |||
| 2,374,590 | + | -0.7 | |||
| 2,374,590 | + | -0.1 | |||
| 2,374,591 | - | -2.1 | |||
| 2,374,729 | + | PS417_11080 | 0.14 | +0.0 |
Or see this region's nucleotide sequence