Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05475 and H281DRAFT_05476 overlap by 1 nucleotides H281DRAFT_05476 and H281DRAFT_05477 are separated by 3 nucleotides
H281DRAFT_05475: H281DRAFT_05475 - Choline dehydrogenase, at 55,833 to 57,488
_05475
H281DRAFT_05476: H281DRAFT_05476 - Short-chain dehydrogenase, at 57,488 to 58,498
_05476
H281DRAFT_05477: H281DRAFT_05477 - Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family, at 58,502 to 60,277
_05477
Position (kb) 57
58
59 Strain fitness (log2 ratio) -1
0
1 at 56.670 kb on + strand, within H281DRAFT_05475 at 56.671 kb on - strand, within H281DRAFT_05475 at 56.877 kb on + strand, within H281DRAFT_05475 at 56.877 kb on + strand, within H281DRAFT_05475 at 56.897 kb on - strand, within H281DRAFT_05475 at 56.958 kb on + strand, within H281DRAFT_05475 at 56.959 kb on - strand, within H281DRAFT_05475 at 56.959 kb on - strand, within H281DRAFT_05475 at 56.959 kb on - strand, within H281DRAFT_05475 at 57.051 kb on + strand, within H281DRAFT_05475 at 57.051 kb on + strand, within H281DRAFT_05475 at 57.364 kb on + strand at 57.364 kb on + strand at 57.365 kb on - strand at 57.839 kb on + strand, within H281DRAFT_05476 at 58.225 kb on - strand, within H281DRAFT_05476 at 58.282 kb on + strand, within H281DRAFT_05476 at 58.523 kb on + strand at 58.579 kb on - strand at 58.814 kb on - strand, within H281DRAFT_05477 at 58.941 kb on + strand, within H281DRAFT_05477 at 58.941 kb on + strand, within H281DRAFT_05477 at 59.414 kb on + strand, within H281DRAFT_05477 at 59.414 kb on + strand, within H281DRAFT_05477 at 59.415 kb on - strand, within H281DRAFT_05477
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 56,670 + H281DRAFT_05475 0.51 +0.3 56,671 - H281DRAFT_05475 0.51 -0.2 56,877 + H281DRAFT_05475 0.63 -0.2 56,877 + H281DRAFT_05475 0.63 -0.9 56,897 - H281DRAFT_05475 0.64 -1.3 56,958 + H281DRAFT_05475 0.68 -1.0 56,959 - H281DRAFT_05475 0.68 +1.2 56,959 - H281DRAFT_05475 0.68 +0.8 56,959 - H281DRAFT_05475 0.68 +0.2 57,051 + H281DRAFT_05475 0.74 +0.4 57,051 + H281DRAFT_05475 0.74 +0.0 57,364 + +0.1 57,364 + +0.4 57,365 - -0.4 57,839 + H281DRAFT_05476 0.35 -0.0 58,225 - H281DRAFT_05476 0.73 -0.9 58,282 + H281DRAFT_05476 0.79 -1.5 58,523 + -0.4 58,579 - +0.2 58,814 - H281DRAFT_05477 0.18 -0.8 58,941 + H281DRAFT_05477 0.25 +0.7 58,941 + H281DRAFT_05477 0.25 +1.1 59,414 + H281DRAFT_05477 0.51 -1.5 59,414 + H281DRAFT_05477 0.51 +0.3 59,415 - H281DRAFT_05477 0.51 -0.2
Or see this region's nucleotide sequence