Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0050
Experiment: A22 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | A22 0.02 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 58,089 | + | Shewana3_0049 | 0.22 | -0.1 | |
| 58,255 | + | Shewana3_0049 | 0.35 | +0.9 | |
| 58,376 | + | Shewana3_0049 | 0.45 | -0.5 | |
| 58,376 | + | Shewana3_0049 | 0.45 | -0.3 | |
| 58,384 | - | Shewana3_0049 | 0.46 | +0.3 | |
| 58,384 | - | Shewana3_0049 | 0.46 | +3.0 | |
| 58,384 | - | Shewana3_0049 | 0.46 | -0.1 | |
| 58,384 | - | Shewana3_0049 | 0.46 | +1.6 | |
| 58,540 | - | Shewana3_0049 | 0.59 | -0.2 | |
| 58,544 | + | Shewana3_0049 | 0.59 | -0.0 | |
| 58,704 | + | Shewana3_0049 | 0.73 | -0.6 | |
| 58,979 | + | -0.4 | |||
| 58,979 | + | +0.8 | |||
| 59,136 | + | +0.6 | |||
| 59,136 | + | -0.9 | |||
| 59,301 | - | Shewana3_0050 | 0.19 | -0.6 | |
| 59,302 | - | Shewana3_0050 | 0.19 | -1.8 | |
| 60,109 | + | +0.1 | |||
| 60,211 | - | -1.0 |
Or see this region's nucleotide sequence