Experiment: Min media with glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS20015 and HSERO_RS20020 are separated by 336 nucleotides HSERO_RS20020 and HSERO_RS20025 are separated by 131 nucleotides
HSERO_RS20015: HSERO_RS20015 - ABC transporter substrate-binding protein, at 4,592,787 to 4,593,962
_RS20015
HSERO_RS20020: HSERO_RS20020 - enoyl-CoA hydratase, at 4,594,299 to 4,595,078
_RS20020
HSERO_RS20025: HSERO_RS20025 - feruloyl-CoA synthase, at 4,595,210 to 4,597,072
_RS20025
Position (kb) 4594
4595
4596 Strain fitness (log2 ratio) -2
-1
0
1 at 4593.397 kb on - strand, within HSERO_RS20015 at 4593.409 kb on + strand, within HSERO_RS20015 at 4593.447 kb on + strand, within HSERO_RS20015 at 4593.466 kb on + strand, within HSERO_RS20015 at 4593.483 kb on + strand, within HSERO_RS20015 at 4593.526 kb on + strand, within HSERO_RS20015 at 4593.617 kb on + strand, within HSERO_RS20015 at 4593.805 kb on - strand, within HSERO_RS20015 at 4594.058 kb on + strand at 4594.159 kb on - strand at 4594.327 kb on - strand at 4594.489 kb on + strand, within HSERO_RS20020 at 4594.498 kb on + strand, within HSERO_RS20020 at 4594.756 kb on - strand, within HSERO_RS20020 at 4594.782 kb on - strand, within HSERO_RS20020 at 4594.838 kb on - strand, within HSERO_RS20020 at 4595.057 kb on + strand at 4595.317 kb on + strand at 4595.413 kb on - strand at 4595.605 kb on + strand, within HSERO_RS20025 at 4595.616 kb on + strand, within HSERO_RS20025 at 4596.034 kb on + strand, within HSERO_RS20025 at 4596.045 kb on + strand, within HSERO_RS20025 at 4596.060 kb on - strand, within HSERO_RS20025
Per-strain Table
Position Strand Gene LocusTag Fraction Min media with glucose remove 4,593,397 - HSERO_RS20015 0.52 +0.6 4,593,409 + HSERO_RS20015 0.53 +0.6 4,593,447 + HSERO_RS20015 0.56 +1.3 4,593,466 + HSERO_RS20015 0.58 +0.4 4,593,483 + HSERO_RS20015 0.59 +0.5 4,593,526 + HSERO_RS20015 0.63 -0.1 4,593,617 + HSERO_RS20015 0.71 +0.2 4,593,805 - HSERO_RS20015 0.87 +0.3 4,594,058 + -0.3 4,594,159 - -0.9 4,594,327 - -0.4 4,594,489 + HSERO_RS20020 0.24 -2.5 4,594,498 + HSERO_RS20020 0.26 -1.8 4,594,756 - HSERO_RS20020 0.59 +0.1 4,594,782 - HSERO_RS20020 0.62 -0.5 4,594,838 - HSERO_RS20020 0.69 +0.2 4,595,057 + +0.3 4,595,317 + +0.3 4,595,413 - -0.7 4,595,605 + HSERO_RS20025 0.21 -0.4 4,595,616 + HSERO_RS20025 0.22 -0.1 4,596,034 + HSERO_RS20025 0.44 -0.3 4,596,045 + HSERO_RS20025 0.45 -2.3 4,596,060 - HSERO_RS20025 0.46 +0.0
Or see this region's nucleotide sequence