Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS09105

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,915,140	+				-1.0
1,915,171	-				-0.1
1,915,171	-				+0.9
1,915,188	-				+2.9
1,915,188	-				-3.1
1,915,188	-				-2.3
1,915,216	+				+1.2
1,915,216	+				+0.1
1,915,216	+				-3.1
1,915,217	-				+0.2
1,915,240	+				+0.4
1,915,241	-				-3.3
1,915,241	-				+0.3
1,915,241	-				-0.8
1,915,276	+				+0.9
1,915,396	+		RR42_RS09100	0.21	+0.7
1,915,473	-		RR42_RS09100	0.33	-3.3
1,915,481	+		RR42_RS09100	0.34	+0.3
1,915,482	-		RR42_RS09100	0.34	+2.8
1,915,598	-		RR42_RS09100	0.53	+0.7
1,915,640	+		RR42_RS09100	0.60	-0.9
1,915,640	+		RR42_RS09100	0.60	+1.6
1,915,641	-		RR42_RS09100	0.60	-1.4
1,915,706	+		RR42_RS09100	0.71	+1.5
1,915,706	+		RR42_RS09100	0.71	-0.5
1,915,706	+		RR42_RS09100	0.71	-0.4
1,915,707	-		RR42_RS09100	0.71	-3.0
1,915,707	-		RR42_RS09100	0.71	-2.3
1,915,707	-		RR42_RS09100	0.71	-2.7
1,915,853	+				+1.7
1,915,854	-				+0.4
1,915,886	+				+1.6
1,915,887	-				-3.4
1,915,887	-				-0.3
1,915,993	+				+1.3
1,915,994	-				-3.2
1,916,150	+				+0.3
1,916,151	-				+1.5
1,916,393	+		RR42_RS09105	0.11	-0.2
1,917,764	+		RR42_RS09105	0.48	-3.1
1,918,200	-		RR42_RS09105	0.60	-4.7
1,918,385	+		RR42_RS09105	0.65	-2.7
1,918,385	+		RR42_RS09105	0.65	-0.9
1,918,757	+		RR42_RS09105	0.76	-2.6
1,918,757	+		RR42_RS09105	0.76	-2.7
1,918,758	-		RR42_RS09105	0.76	-0.5
1,918,760	-		RR42_RS09105	0.76	-1.1
1,918,982	+		RR42_RS09105	0.82	-0.8
1,918,983	-		RR42_RS09105	0.82	+1.6
1,918,983	-		RR42_RS09105	0.82	-3.3
1,919,642	+				+0.0
1,919,642	+				+0.6
1,919,863	+				-0.8
1,919,863	+				-0.2
1,919,864	-				+0.2
1,919,864	-				+0.9
1,920,122	+				+1.8
1,920,122	+				+1.3
1,920,181	+				-0.1
1,920,182	-				+0.9
1,920,293	+		RR42_RS09110	0.13	+1.4
1,920,515	+		RR42_RS09110	0.22	-1.0
1,920,516	-		RR42_RS09110	0.22	+0.9
1,920,516	-		RR42_RS09110	0.22	-0.4
1,920,516	-		RR42_RS09110	0.22	-1.5
1,920,605	+		RR42_RS09110	0.26	+0.0
1,920,608	+		RR42_RS09110	0.26	-0.9
1,920,608	+		RR42_RS09110	0.26	-1.4
1,920,608	+		RR42_RS09110	0.26	-1.2
1,920,609	-		RR42_RS09110	0.26	+1.9
1,920,623	+		RR42_RS09110	0.26	-2.5