Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_27730 and AO356_27735 are separated by 15 nucleotides AO356_27735 and AO356_27740 are separated by 428 nucleotides
AO356_27730: AO356_27730 - ATP-dependent DNA ligase, at 6,330,240 to 6,332,228
_27730
AO356_27735: AO356_27735 - aspartyl beta-hydroxylase, at 6,332,244 to 6,333,143
_27735
AO356_27740: AO356_27740 - ABC transporter ATP-binding protein, at 6,333,572 to 6,335,137
_27740
Position (kb)
6332
6333
6334 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6331.282 kb on + strand, within AO356_27730 at 6331.413 kb on + strand, within AO356_27730 at 6331.413 kb on + strand, within AO356_27730 at 6331.413 kb on + strand, within AO356_27730 at 6331.413 kb on + strand, within AO356_27730 at 6331.413 kb on + strand, within AO356_27730 at 6331.414 kb on - strand, within AO356_27730 at 6331.414 kb on - strand, within AO356_27730 at 6331.414 kb on - strand, within AO356_27730 at 6331.414 kb on - strand, within AO356_27730 at 6331.417 kb on - strand, within AO356_27730 at 6331.417 kb on - strand, within AO356_27730 at 6331.978 kb on - strand, within AO356_27730 at 6331.978 kb on - strand, within AO356_27730 at 6332.023 kb on + strand, within AO356_27730 at 6332.024 kb on - strand, within AO356_27730 at 6332.109 kb on + strand at 6332.109 kb on + strand at 6332.109 kb on + strand at 6332.109 kb on + strand at 6332.109 kb on + strand at 6332.109 kb on + strand at 6332.109 kb on + strand at 6332.109 kb on + strand at 6332.109 kb on + strand at 6332.109 kb on + strand at 6332.109 kb on + strand at 6332.109 kb on + strand at 6332.109 kb on + strand at 6332.110 kb on - strand at 6332.110 kb on - strand at 6332.110 kb on - strand at 6332.110 kb on - strand at 6332.110 kb on - strand at 6332.110 kb on - strand at 6332.110 kb on - strand at 6332.110 kb on - strand at 6332.110 kb on - strand at 6332.110 kb on - strand at 6332.110 kb on - strand at 6332.110 kb on - strand at 6332.160 kb on + strand at 6332.161 kb on - strand at 6332.299 kb on + strand at 6332.300 kb on - strand at 6332.300 kb on - strand at 6332.300 kb on - strand at 6332.302 kb on + strand at 6332.303 kb on - strand at 6332.433 kb on - strand, within AO356_27735 at 6332.537 kb on - strand, within AO356_27735 at 6332.537 kb on - strand, within AO356_27735 at 6332.611 kb on + strand, within AO356_27735 at 6332.611 kb on + strand, within AO356_27735 at 6332.611 kb on + strand, within AO356_27735 at 6332.612 kb on - strand, within AO356_27735 at 6332.657 kb on - strand, within AO356_27735 at 6332.803 kb on + strand, within AO356_27735 at 6332.815 kb on + strand, within AO356_27735 at 6332.866 kb on + strand, within AO356_27735 at 6333.010 kb on + strand, within AO356_27735 at 6333.011 kb on - strand, within AO356_27735 at 6333.011 kb on - strand, within AO356_27735 at 6333.071 kb on + strand at 6333.071 kb on + strand at 6333.071 kb on + strand at 6333.118 kb on + strand at 6333.118 kb on + strand at 6333.119 kb on - strand at 6333.321 kb on - strand at 6333.337 kb on - strand at 6333.337 kb on - strand at 6333.337 kb on - strand at 6333.382 kb on + strand at 6333.382 kb on + strand at 6333.408 kb on + strand at 6333.408 kb on + strand at 6333.424 kb on + strand at 6333.491 kb on + strand at 6333.491 kb on + strand at 6333.492 kb on - strand at 6333.492 kb on - strand at 6333.502 kb on + strand at 6333.502 kb on + strand at 6333.502 kb on + strand at 6333.503 kb on - strand at 6333.503 kb on - strand at 6333.516 kb on + strand at 6333.516 kb on + strand at 6333.516 kb on + strand at 6333.516 kb on + strand at 6333.520 kb on + strand at 6333.521 kb on - strand at 6333.556 kb on + strand at 6333.562 kb on + strand at 6333.563 kb on - strand at 6333.563 kb on - strand at 6333.854 kb on + strand, within AO356_27740 at 6333.854 kb on + strand, within AO356_27740 at 6333.854 kb on + strand, within AO356_27740 at 6333.855 kb on - strand, within AO356_27740 at 6333.855 kb on - strand, within AO356_27740 at 6333.855 kb on - strand, within AO356_27740 at 6333.932 kb on + strand, within AO356_27740
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 6,331,282 + AO356_27730 0.52 +1.0 6,331,413 + AO356_27730 0.59 +0.0 6,331,413 + AO356_27730 0.59 +0.2 6,331,413 + AO356_27730 0.59 +0.2 6,331,413 + AO356_27730 0.59 -0.2 6,331,413 + AO356_27730 0.59 +0.3 6,331,414 - AO356_27730 0.59 -0.9 6,331,414 - AO356_27730 0.59 -0.7 6,331,414 - AO356_27730 0.59 -1.6 6,331,414 - AO356_27730 0.59 -0.1 6,331,417 - AO356_27730 0.59 -0.5 6,331,417 - AO356_27730 0.59 -0.7 6,331,978 - AO356_27730 0.87 +1.9 6,331,978 - AO356_27730 0.87 -0.7 6,332,023 + AO356_27730 0.90 +1.4 6,332,024 - AO356_27730 0.90 -0.2 6,332,109 + -0.2 6,332,109 + -0.4 6,332,109 + +0.1 6,332,109 + +0.3 6,332,109 + +0.5 6,332,109 + +0.4 6,332,109 + +0.2 6,332,109 + +1.4 6,332,109 + -0.2 6,332,109 + -1.1 6,332,109 + +0.5 6,332,109 + -0.2 6,332,109 + +1.5 6,332,110 - +1.7 6,332,110 - -0.5 6,332,110 - +0.1 6,332,110 - +0.3 6,332,110 - +0.2 6,332,110 - -2.3 6,332,110 - +0.5 6,332,110 - +0.2 6,332,110 - +0.6 6,332,110 - +0.8 6,332,110 - +1.0 6,332,110 - -0.5 6,332,160 + +0.6 6,332,161 - -0.4 6,332,299 + -0.5 6,332,300 - +0.1 6,332,300 - +0.9 6,332,300 - -1.4 6,332,302 + -0.5 6,332,303 - -0.1 6,332,433 - AO356_27735 0.21 -0.1 6,332,537 - AO356_27735 0.33 +0.4 6,332,537 - AO356_27735 0.33 +0.8 6,332,611 + AO356_27735 0.41 +1.6 6,332,611 + AO356_27735 0.41 +0.1 6,332,611 + AO356_27735 0.41 -0.9 6,332,612 - AO356_27735 0.41 +1.0 6,332,657 - AO356_27735 0.46 -0.1 6,332,803 + AO356_27735 0.62 -2.2 6,332,815 + AO356_27735 0.63 -0.2 6,332,866 + AO356_27735 0.69 +0.8 6,333,010 + AO356_27735 0.85 +1.4 6,333,011 - AO356_27735 0.85 -0.8 6,333,011 - AO356_27735 0.85 -0.2 6,333,071 + -0.5 6,333,071 + +0.7 6,333,071 + -1.7 6,333,118 + +0.9 6,333,118 + -2.5 6,333,119 - +1.8 6,333,321 - +0.2 6,333,337 - +1.4 6,333,337 - -1.1 6,333,337 - -0.3 6,333,382 + -1.3 6,333,382 + +0.8 6,333,408 + -0.4 6,333,408 + +0.2 6,333,424 + -0.1 6,333,491 + -0.9 6,333,491 + +0.0 6,333,492 - +1.6 6,333,492 - -0.7 6,333,502 + -1.2 6,333,502 + +1.0 6,333,502 + +0.4 6,333,503 - -0.6 6,333,503 - +0.6 6,333,516 + +0.9 6,333,516 + +0.8 6,333,516 + -0.9 6,333,516 + +0.7 6,333,520 + +1.5 6,333,521 - +0.0 6,333,556 + -0.3 6,333,562 + -0.5 6,333,563 - +1.1 6,333,563 - +0.6 6,333,854 + AO356_27740 0.18 +0.7 6,333,854 + AO356_27740 0.18 +0.3 6,333,854 + AO356_27740 0.18 -0.1 6,333,855 - AO356_27740 0.18 +0.3 6,333,855 - AO356_27740 0.18 -0.5 6,333,855 - AO356_27740 0.18 +1.0 6,333,932 + AO356_27740 0.23 -0.5
Or see this region's nucleotide sequence