Experiment: methylglyoxal 0.016 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_25660 and AO356_25665 are separated by 59 nucleotides AO356_25665 and AO356_25670 are separated by 47 nucleotides AO356_25670 and AO356_25675 are separated by 31 nucleotides
AO356_25660: AO356_25660 - MFS transporter, at 5,802,474 to 5,803,688
_25660
AO356_25665: AO356_25665 - 3-beta hydroxysteroid dehydrogenase, at 5,803,748 to 5,804,614
_25665
AO356_25670: AO356_25670 - regulator, at 5,804,662 to 5,805,294
_25670
AO356_25675: AO356_25675 - histidine kinase, at 5,805,326 to 5,806,687
_25675
Position (kb) 5803
5804
5805 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5802.777 kb on + strand, within AO356_25660 at 5802.778 kb on - strand, within AO356_25660 at 5802.957 kb on + strand, within AO356_25660 at 5803.110 kb on - strand, within AO356_25660 at 5803.139 kb on - strand, within AO356_25660 at 5803.343 kb on - strand, within AO356_25660 at 5803.343 kb on - strand, within AO356_25660 at 5803.401 kb on + strand, within AO356_25660 at 5803.402 kb on - strand, within AO356_25660 at 5803.402 kb on - strand, within AO356_25660 at 5803.402 kb on - strand, within AO356_25660 at 5803.597 kb on - strand at 5803.678 kb on - strand at 5803.704 kb on + strand at 5803.704 kb on + strand at 5803.704 kb on + strand at 5803.747 kb on + strand at 5803.756 kb on - strand at 5803.756 kb on - strand at 5803.756 kb on - strand at 5803.797 kb on + strand at 5803.798 kb on - strand at 5804.274 kb on + strand, within AO356_25665 at 5804.531 kb on + strand at 5804.532 kb on - strand at 5804.532 kb on - strand at 5804.603 kb on + strand at 5804.603 kb on + strand at 5804.604 kb on - strand at 5804.907 kb on - strand, within AO356_25670 at 5804.907 kb on - strand, within AO356_25670 at 5804.907 kb on - strand, within AO356_25670 at 5804.974 kb on + strand, within AO356_25670 at 5804.975 kb on - strand, within AO356_25670 at 5804.975 kb on - strand, within AO356_25670 at 5804.975 kb on - strand, within AO356_25670 at 5804.975 kb on - strand, within AO356_25670 at 5804.978 kb on + strand, within AO356_25670 at 5805.014 kb on + strand, within AO356_25670 at 5805.014 kb on + strand, within AO356_25670 at 5805.015 kb on - strand, within AO356_25670 at 5805.020 kb on + strand, within AO356_25670 at 5805.020 kb on + strand, within AO356_25670 at 5805.021 kb on - strand, within AO356_25670 at 5805.021 kb on - strand, within AO356_25670 at 5805.021 kb on - strand, within AO356_25670 at 5805.029 kb on + strand, within AO356_25670 at 5805.030 kb on - strand, within AO356_25670 at 5805.030 kb on - strand, within AO356_25670 at 5805.030 kb on - strand, within AO356_25670 at 5805.030 kb on - strand, within AO356_25670 at 5805.030 kb on - strand, within AO356_25670 at 5805.030 kb on - strand, within AO356_25670 at 5805.062 kb on + strand, within AO356_25670
Per-strain Table
Position Strand Gene LocusTag Fraction methylglyoxal 0.016 vol% remove 5,802,777 + AO356_25660 0.25 -0.5 5,802,778 - AO356_25660 0.25 +1.2 5,802,957 + AO356_25660 0.40 +0.5 5,803,110 - AO356_25660 0.52 -3.3 5,803,139 - AO356_25660 0.55 +1.6 5,803,343 - AO356_25660 0.72 -0.3 5,803,343 - AO356_25660 0.72 -1.7 5,803,401 + AO356_25660 0.76 +1.5 5,803,402 - AO356_25660 0.76 -1.1 5,803,402 - AO356_25660 0.76 -1.1 5,803,402 - AO356_25660 0.76 -2.1 5,803,597 - +0.5 5,803,678 - +0.5 5,803,704 + +1.5 5,803,704 + -1.1 5,803,704 + +1.1 5,803,747 + -2.9 5,803,756 - -1.3 5,803,756 - -1.7 5,803,756 - +0.9 5,803,797 + -0.2 5,803,798 - +0.6 5,804,274 + AO356_25665 0.61 +1.2 5,804,531 + +0.2 5,804,532 - +1.8 5,804,532 - -0.5 5,804,603 + -1.0 5,804,603 + +1.0 5,804,604 - +0.2 5,804,907 - AO356_25670 0.39 +0.4 5,804,907 - AO356_25670 0.39 -0.6 5,804,907 - AO356_25670 0.39 +0.6 5,804,974 + AO356_25670 0.49 +1.2 5,804,975 - AO356_25670 0.49 +1.4 5,804,975 - AO356_25670 0.49 -0.3 5,804,975 - AO356_25670 0.49 -1.0 5,804,975 - AO356_25670 0.49 +0.8 5,804,978 + AO356_25670 0.50 -1.4 5,805,014 + AO356_25670 0.56 +0.6 5,805,014 + AO356_25670 0.56 +0.2 5,805,015 - AO356_25670 0.56 +1.1 5,805,020 + AO356_25670 0.57 -0.1 5,805,020 + AO356_25670 0.57 +1.2 5,805,021 - AO356_25670 0.57 -1.9 5,805,021 - AO356_25670 0.57 -1.4 5,805,021 - AO356_25670 0.57 +2.1 5,805,029 + AO356_25670 0.58 +0.6 5,805,030 - AO356_25670 0.58 +0.2 5,805,030 - AO356_25670 0.58 +0.0 5,805,030 - AO356_25670 0.58 +0.4 5,805,030 - AO356_25670 0.58 +0.5 5,805,030 - AO356_25670 0.58 +0.7 5,805,030 - AO356_25670 0.58 +0.8 5,805,062 + AO356_25670 0.63 -0.5
Or see this region's nucleotide sequence