Strain Fitness in Shewanella loihica PV-4 around Shew_3430

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
4,094,112	+				+0.0
4,094,767	-		Shew_3430	0.44	-1.5
4,095,353	+		Shew_3430	0.74	-0.4
4,095,487	-		Shew_3430	0.80	-1.6
4,096,068	+				-0.9
4,096,070	+				-1.3
4,096,365	+	aceE	Shew_3431	0.18	-1.3
4,096,365	+	aceE	Shew_3431	0.18	-1.0
4,096,371	+	aceE	Shew_3431	0.18	-0.8
4,096,373	-	aceE	Shew_3431	0.18	-0.5
4,096,557	+	aceE	Shew_3431	0.25	-0.8
4,096,575	-	aceE	Shew_3431	0.26	-0.8
4,096,625	+	aceE	Shew_3431	0.28	-0.1
4,096,656	-	aceE	Shew_3431	0.29	-0.7
4,096,866	-	aceE	Shew_3431	0.37	-1.3