Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03957

Experiment: PYE with Vancomycin 0.007 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Vancomycin 0.007 mg/ml
2,057,686	+		CCNA_01914	0.74	-0.5
2,057,686	+		CCNA_01914	0.74	-0.3
2,057,703	-		CCNA_01914	0.75	-0.5
2,057,745	+		CCNA_01914	0.80	-0.3
2,057,782	+		CCNA_01914	0.84	+1.2
2,057,790	-		CCNA_01914	0.85	-0.5
2,057,791	+		CCNA_01914	0.85	+0.1
2,057,791	-		CCNA_01914	0.85	+1.1
2,057,793	+		CCNA_01914	0.85	-0.1
2,057,799	+		CCNA_01914	0.86	-0.7
2,057,799	+		CCNA_01914	0.86	+0.0
2,057,816	-		CCNA_01914	0.88	+1.1
2,057,825	+		CCNA_01914	0.89	-0.3
2,057,835	+				+0.6
2,057,843	+				+0.9
2,057,846	-				-3.0
2,057,870	+				-0.3
2,057,880	+				-0.3
2,057,884	+				+0.5
2,057,915	-				+1.1
2,057,932	-				-1.1
2,057,981	+				+4.3
2,057,990	+				+0.4
2,057,991	+				+0.7
2,058,018	+		CCNA_01915	0.13	-0.7
2,058,044	-		CCNA_01915	0.16	+0.7
2,058,137	+		CCNA_01915	0.29	-1.4
2,058,191	+		CCNA_01915	0.36	+0.4
2,058,204	-		CCNA_01915	0.38	+0.4
2,058,229	+		CCNA_01915	0.41	+0.1
2,058,251	-		CCNA_01915	0.44	+0.1
2,058,253	+		CCNA_01915	0.45	+0.5
2,058,263	+		CCNA_01915	0.46	+0.0
2,058,263	+		CCNA_01915	0.46	+2.7
2,058,346	-		CCNA_01915	0.57	+0.4
2,058,346	-		CCNA_01915	0.57	+0.7
2,058,346	-		CCNA_01915	0.57	+0.7
2,058,365	-		CCNA_01915	0.60	+0.1
2,058,365	-		CCNA_01915	0.60	-0.9
2,058,369	+		CCNA_01915	0.60	-1.4
2,058,369	+		CCNA_01915	0.60	+0.6
2,058,377	-		CCNA_01915	0.61	+0.4
2,058,451	+		CCNA_01915	0.71	-0.1
2,058,459	-		CCNA_01915	0.72	-0.1
2,058,475	-		CCNA_01915	0.75	+1.7
2,058,505	+		CCNA_01915	0.79	-1.9
2,058,513	-		CCNA_01915	0.80	+0.9
2,058,513	-		CCNA_01915	0.80	-0.5
2,058,515	-		CCNA_01915	0.80	+1.7
2,058,639	+				-0.1
2,058,644	+				+0.3
2,058,652	-				-0.9
2,058,707	+		CCNA_03957	0.22	+1.0
2,058,707	+		CCNA_03957	0.22	-0.8
2,058,707	+		CCNA_03957	0.22	-0.3
2,058,707	+		CCNA_03957	0.22	-1.9
2,058,707	+		CCNA_03957	0.22	-1.0
2,058,707	+		CCNA_03957	0.22	-1.7
2,058,707	+		CCNA_03957	0.22	-0.3
2,058,715	-		CCNA_03957	0.26	-2.2
2,058,725	+		CCNA_03957	0.30	-0.5
2,058,725	-		CCNA_03957	0.30	+1.7
2,058,762	+		CCNA_03957	0.46	-0.7
2,058,762	+		CCNA_03957	0.46	+0.7
2,058,782	-		CCNA_03957	0.54	-0.1
2,058,788	-		CCNA_03957	0.57	-1.3
2,058,808	+		CCNA_03957	0.65	-2.5
2,058,816	-		CCNA_03957	0.69	-0.1
2,058,816	-		CCNA_03957	0.69	-0.7
2,058,942	+				-0.6
2,058,942	+				+0.7
2,058,950	-				+4.3
2,058,964	-		CCNA_01916	0.11	+0.5
2,058,990	+		CCNA_01916	0.13	-0.5
2,058,990	+		CCNA_01916	0.13	+0.4
2,058,998	-		CCNA_01916	0.14	-2.0
2,059,069	-		CCNA_01916	0.21	-1.2
2,059,137	-		CCNA_01916	0.28	-1.5
2,059,167	+		CCNA_01916	0.31	+1.1
2,059,167	+		CCNA_01916	0.31	+0.4
2,059,175	-		CCNA_01916	0.32	-1.5
2,059,212	+		CCNA_01916	0.36	+0.1
2,059,239	-		CCNA_01916	0.38	+0.5
2,059,239	-		CCNA_01916	0.38	-1.2
2,059,239	-		CCNA_01916	0.38	+0.5
2,059,242	+		CCNA_01916	0.39	+0.7
2,059,277	-		CCNA_01916	0.42	+1.7
2,059,277	-		CCNA_01916	0.42	+0.4
2,059,280	-				+1.7
2,059,290	+		CCNA_01916	0.44	+0.7
2,059,311	+		CCNA_01916	0.46	+0.7
2,059,311	+		CCNA_01916	0.46	+0.7
2,059,319	-		CCNA_01916	0.47	-0.3
2,059,319	-		CCNA_01916	0.47	+2.7
2,059,346	-		CCNA_01916	0.49	-1.4
2,059,374	-		CCNA_01916	0.52	+1.7
2,059,396	+		CCNA_01916	0.54	-0.5
2,059,460	-		CCNA_01916	0.61	+0.7
2,059,472	+		CCNA_01916	0.62	-0.9
2,059,480	-		CCNA_01916	0.63	+1.0
2,059,487	+		CCNA_01916	0.64	+1.7
2,059,505	+		CCNA_01916	0.65	-0.1
2,059,505	+		CCNA_01916	0.65	-1.7
2,059,513	-		CCNA_01916	0.66	+1.1
2,059,513	-		CCNA_01916	0.66	+0.1
2,059,518	+				+2.7
2,059,520	-		CCNA_01916	0.67	+0.3
2,059,526	-		CCNA_01916	0.67	+1.0
2,059,591	+		CCNA_01916	0.74	+0.1
2,059,599	+		CCNA_01916	0.75	-0.7
2,059,636	+		CCNA_01916	0.79	+2.7
2,059,644	-		CCNA_01916	0.79	+0.6
2,059,685	+		CCNA_01916	0.84	-1.8
2,059,693	-		CCNA_01916	0.84	-0.3
2,059,724	+		CCNA_01916	0.88	-0.1
2,059,725	-		CCNA_01916	0.88	-0.7
2,059,757	+				-0.1
2,059,768	+				+0.1
2,059,768	+				+0.7
2,059,770	-				+0.4
2,059,770	-				+0.0
2,059,770	-				+0.3
2,059,778	+				-0.5
2,059,825	-				-1.4
2,059,825	-				+0.4
2,059,832	+				+0.4
2,059,840	-				+0.8
2,059,878	+				+0.4