Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03670

Experiment: PYE with Vancomycin 0.007 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Vancomycin 0.007 mg/ml
3,829,864	+		CCNA_03668	0.40	-2.1
3,829,892	-		CCNA_03668	0.54	-1.6
3,829,903	+		CCNA_03668	0.60	+2.1
3,829,911	-		CCNA_03668	0.65	-1.3
3,829,911	-		CCNA_03668	0.65	+2.4
3,829,970	-				+0.1
3,830,003	-				-0.2
3,830,040	+				-0.2
3,830,040	+				-1.7
3,830,040	+				-1.1
3,830,040	+				-1.1
3,830,040	+				+0.8
3,830,040	+				-0.2
3,830,048	-				+0.8
3,830,048	-				+0.4
3,830,071	-				-0.4
3,830,118	+				-0.0
3,830,142	+				+0.1
3,830,143	-				-0.8
3,830,152	+				+0.3
3,830,162	+				+0.6
3,830,162	+				+0.4
3,830,162	+				-0.4
3,830,162	+				-0.7
3,830,171	-				+0.1
3,830,184	+				+1.0
3,830,189	+				+0.8
3,830,272	-				+0.4
3,830,272	-				+0.4
3,830,272	-				+0.1
3,830,274	+				+0.5
3,830,274	+				-0.7
3,830,274	+				-0.4
3,830,274	+				+1.2
3,830,274	+				-0.7
3,830,274	+				+1.6
3,830,282	-				+0.4
3,830,282	-				-0.6
3,830,282	-				-1.9
3,830,299	-				-0.3
3,830,312	-				-0.8
3,830,334	+				+2.4
3,830,334	+				+0.2
3,830,334	+				+0.1
3,830,334	+				-1.7
3,830,334	+				+0.8
3,830,334	+				-0.7
3,830,342	-				-1.2
3,830,342	-				-2.0
3,830,342	-				-0.3
3,830,342	-				-0.1
3,830,342	-				-1.1
3,830,342	-				+0.8
3,830,342	-				-1.1
3,830,342	-				-1.2
3,830,342	-				-0.2
3,830,356	-				-0.6
3,830,393	-				-2.5
3,830,443	+		CCNA_03669	0.16	+0.4
3,830,474	-		CCNA_03669	0.25	-1.1
3,830,524	+		CCNA_03669	0.39	-2.3
3,830,532	-		CCNA_03669	0.41	+0.4
3,830,593	+		CCNA_03669	0.59	-0.4
3,830,661	+		CCNA_03669	0.79	+1.4
3,830,669	-		CCNA_03669	0.81	-0.3
3,830,697	+		CCNA_03669	0.89	+0.4
3,830,715	-				-1.0
3,830,734	-				-0.8
3,830,755	+				-0.9
3,830,755	+				+1.4
3,830,763	-				+1.8
3,830,790	-				-2.1
3,830,790	-				+0.5
3,830,810	-				-2.4
3,830,810	-				+0.2
3,830,812	+				+0.2
3,830,825	+				+0.4
3,830,825	+				-0.6
3,830,868	+				-1.3
3,830,881	+				-1.1
3,830,883	+				-0.1
3,830,894	+				+2.4
3,830,901	-				-2.9
3,830,901	-				-2.3
3,830,902	-				-1.2
3,830,908	-				-1.1
3,830,937	+				+0.2
3,830,945	-				+0.6
3,830,970	-		CCNA_03670	0.13	-1.6
3,830,971	-		CCNA_03670	0.13	+0.8
3,830,981	+		CCNA_03670	0.14	-1.3
3,830,989	-		CCNA_03670	0.15	+1.4
3,830,989	-		CCNA_03670	0.15	-0.6
3,830,989	-		CCNA_03670	0.15	-1.9
3,831,120	+		CCNA_03670	0.30	-0.8
3,831,165	+		CCNA_03670	0.35	+1.2
3,831,170	+		CCNA_03670	0.36	+0.1
3,831,175	-		CCNA_03670	0.36	-0.5
3,831,185	-		CCNA_03670	0.38	+0.7
3,831,191	+		CCNA_03670	0.38	-0.5
3,831,191	+		CCNA_03670	0.38	-2.4
3,831,199	-		CCNA_03670	0.39	-1.7
3,831,199	-		CCNA_03670	0.39	+0.7
3,831,199	-		CCNA_03670	0.39	-1.8
3,831,199	-		CCNA_03670	0.39	-0.8
3,831,199	-		CCNA_03670	0.39	+1.0
3,831,217	+		CCNA_03670	0.41	-0.5
3,831,242	-		CCNA_03670	0.44	-0.8
3,831,262	+		CCNA_03670	0.47	-2.2
3,831,262	+		CCNA_03670	0.47	-0.3
3,831,265	-		CCNA_03670	0.47	-1.2
3,831,270	-		CCNA_03670	0.48	+0.8
3,831,270	-		CCNA_03670	0.48	+1.3
3,831,270	-		CCNA_03670	0.48	-1.1
3,831,270	-		CCNA_03670	0.48	-0.8
3,831,270	-		CCNA_03670	0.48	-1.8
3,831,272	+		CCNA_03670	0.48	-1.7
3,831,272	+		CCNA_03670	0.48	-0.7
3,831,272	+		CCNA_03670	0.48	-1.4
3,831,280	-		CCNA_03670	0.49	-1.6
3,831,280	-		CCNA_03670	0.49	+0.9
3,831,280	-		CCNA_03670	0.49	+0.1
3,831,288	-		CCNA_03670	0.50	-0.4
3,831,330	-		CCNA_03670	0.55	-1.5
3,831,355	+		CCNA_03670	0.58	-1.7
3,831,407	-		CCNA_03670	0.64	-2.4
3,831,419	-		CCNA_03670	0.65	-1.6
3,831,426	-		CCNA_03670	0.66	-1.1
3,831,433	-		CCNA_03670	0.67	-1.9
3,831,514	+		CCNA_03670	0.76	-0.9
3,831,576	-		CCNA_03670	0.83	-1.0
3,831,592	+		CCNA_03670	0.85	-0.2
3,831,592	+		CCNA_03670	0.85	-2.1
3,831,597	+		CCNA_03670	0.86	-0.1
3,831,597	+		CCNA_03670	0.86	-0.9
3,831,600	-		CCNA_03670	0.86	-2.1
3,831,605	-		CCNA_03670	0.87	-1.1
3,831,623	-		CCNA_03670	0.89	+0.4
3,831,625	+		CCNA_03670	0.89	-0.3
3,831,654	-				+0.1
3,831,670	-				-0.8
3,831,707	-				-2.1
3,831,710	+				+1.4
3,831,716	-				-2.8
3,831,808	+		CCNA_03671	0.12	-2.1
3,831,837	-		CCNA_03671	0.16	-0.2
3,831,847	-		CCNA_03671	0.17	-2.3
3,831,885	+		CCNA_03671	0.22	-2.1
3,831,885	+		CCNA_03671	0.22	-0.2
3,832,015	-		CCNA_03671	0.38	-0.4
3,832,021	+		CCNA_03671	0.39	-1.0
3,832,027	+		CCNA_03671	0.40	-1.7
3,832,027	+		CCNA_03671	0.40	+0.6
3,832,027	+		CCNA_03671	0.40	+0.4
3,832,027	+		CCNA_03671	0.40	+0.6
3,832,035	-		CCNA_03671	0.41	+0.4
3,832,035	-		CCNA_03671	0.41	-0.5
3,832,043	+		CCNA_03671	0.42	+1.4
3,832,068	+		CCNA_03671	0.45	+1.4
3,832,074	-		CCNA_03671	0.46	-1.4
3,832,077	+		CCNA_03671	0.46	-0.5
3,832,086	-		CCNA_03671	0.47	+1.4
3,832,105	+		CCNA_03671	0.50	-1.2
3,832,134	-		CCNA_03671	0.53	-1.5
3,832,135	+		CCNA_03671	0.53	+1.4
3,832,135	+		CCNA_03671	0.53	-1.1
3,832,136	+		CCNA_03671	0.53	+0.4
3,832,143	-		CCNA_03671	0.54	-0.9
3,832,146	+		CCNA_03671	0.55	+0.8
3,832,161	-		CCNA_03671	0.57	+0.2
3,832,183	-		CCNA_03671	0.59	+0.1
3,832,205	-		CCNA_03671	0.62	-1.8
3,832,208	+		CCNA_03671	0.63	-1.0
3,832,224	-		CCNA_03671	0.65	+0.2
3,832,251	-		CCNA_03671	0.68	+0.2
3,832,253	-		CCNA_03671	0.68	+0.5
3,832,253	-		CCNA_03671	0.68	-0.9
3,832,304	-		CCNA_03671	0.75	-0.2
3,832,341	-		CCNA_03671	0.79	+0.4
3,832,360	+		CCNA_03671	0.82	-0.9
3,832,372	-		CCNA_03671	0.83	+0.5
3,832,372	-		CCNA_03671	0.83	-0.6
3,832,393	+		CCNA_03671	0.86	-0.8
3,832,393	+		CCNA_03671	0.86	-0.8
3,832,401	-		CCNA_03671	0.87	-0.8
3,832,401	-		CCNA_03671	0.87	-0.4
3,832,445	-				+0.8
3,832,445	-				-0.2
3,832,445	-				+1.4
3,832,469	-				-0.8
3,832,562	-				+0.1
3,832,562	-				+0.8
3,832,565	+				+1.4
3,832,573	-				-0.1
3,832,578	-				+1.4
3,832,592	+				+2.1
3,832,604	-				+1.8
3,832,622	-		CCNA_03672	0.12	+2.3
3,832,641	-		CCNA_03672	0.15	+1.0
3,832,665	+		CCNA_03672	0.19	-1.7
3,832,665	+		CCNA_03672	0.19	+1.4
3,832,673	-		CCNA_03672	0.20	+0.5
3,832,673	-		CCNA_03672	0.20	+0.7
3,832,682	+		CCNA_03672	0.22	+2.4
3,832,706	+		CCNA_03672	0.26	+0.1
3,832,711	+		CCNA_03672	0.27	+1.8