Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_3948

Experiment: KB with Nitrofurantoin 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nitrofurantoin 0.0625 mg/ml
4,695,864	+		Psyr_3947	0.61	+0.7
4,695,865	-		Psyr_3947	0.61	-2.1
4,695,917	-		Psyr_3947	0.66	+1.3
4,696,155	+				-0.3
4,696,249	-				+0.0
4,696,249	-				+1.2
4,697,031	-				+0.7
4,697,038	-				-0.2
4,697,078	-				-2.1
4,697,179	+		Psyr_3949	0.19	-2.7
4,697,217	-		Psyr_3949	0.25	-2.5
4,697,217	-		Psyr_3949	0.25	-3.5
4,697,217	-		Psyr_3949	0.25	-2.9
4,697,252	+		Psyr_3949	0.30	-2.5
4,697,252	+		Psyr_3949	0.30	-2.5
4,697,252	+		Psyr_3949	0.30	-2.7
4,697,252	+		Psyr_3949	0.30	-2.3
4,697,252	+		Psyr_3949	0.30	-3.1
4,697,252	+		Psyr_3949	0.30	-0.7
4,697,253	-		Psyr_3949	0.30	-1.5
4,697,253	-		Psyr_3949	0.30	-2.2
4,697,399	+		Psyr_3949	0.51	-1.9
4,697,400	-		Psyr_3949	0.52	-3.3
4,697,400	-		Psyr_3949	0.52	-0.9
4,697,465	+		Psyr_3949	0.61	-3.2
4,697,465	+		Psyr_3949	0.61	-1.3
4,697,465	+		Psyr_3949	0.61	-2.7
4,697,466	-		Psyr_3949	0.61	-0.9
4,697,702	+				-3.4
4,697,702	+				-2.8
4,697,702	+				-1.9
4,697,702	+				-0.3
4,697,702	+				-1.7
4,697,702	+				-1.0
4,697,702	+				-1.8
4,697,703	-				-1.3
4,697,703	-				-0.6
4,697,703	-				+0.6
4,697,703	-				-3.9
4,697,703	-				-1.9
4,697,792	+				-0.9
4,697,792	+				-2.9
4,697,792	+				-3.3
4,697,793	-				-0.1
4,697,793	-				-1.1