Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS11905

Experiment: R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM
2,637,684	-		LRK54_RS11900	0.35	+1.5
2,637,684	-		LRK54_RS11900	0.35	+2.4
2,637,725	+		LRK54_RS11900	0.39	+2.6
2,637,725	+		LRK54_RS11900	0.39	+2.8
2,637,725	+		LRK54_RS11900	0.39	+2.7
2,637,725	+		LRK54_RS11900	0.39	+1.3
2,637,725	+		LRK54_RS11900	0.39	+2.3
2,637,725	+		LRK54_RS11900	0.39	+2.3
2,637,726	-		LRK54_RS11900	0.39	+2.2
2,637,726	-		LRK54_RS11900	0.39	+1.2
2,637,726	-		LRK54_RS11900	0.39	+1.1
2,637,726	-		LRK54_RS11900	0.39	+2.2
2,637,726	-		LRK54_RS11900	0.39	+2.0
2,637,726	-		LRK54_RS11900	0.39	+2.2
2,637,726	-		LRK54_RS11900	0.39	+1.6
2,637,726	-		LRK54_RS11900	0.39	+3.2
2,637,726	-		LRK54_RS11900	0.39	+2.1
2,637,726	-		LRK54_RS11900	0.39	+1.7
2,637,734	+		LRK54_RS11900	0.39	-0.0
2,637,734	+		LRK54_RS11900	0.39	+1.9
2,637,735	-		LRK54_RS11900	0.40	+1.9
2,637,735	-		LRK54_RS11900	0.40	+2.8
2,637,735	-		LRK54_RS11900	0.40	+2.6
2,637,735	-		LRK54_RS11900	0.40	+1.7
2,637,737	-		LRK54_RS11900	0.40	+0.2
2,637,816	-		LRK54_RS11900	0.47	+1.4
2,638,309	+				+1.6
2,638,310	-				+2.0
2,638,310	-				+2.5
2,638,310	-				+1.0
2,638,415	+				+1.9
2,638,415	+				+1.9
2,638,416	-				+2.1
2,638,416	-				+1.5
2,638,416	-				+1.8
2,638,416	-				-0.0
2,638,416	-				+1.9
2,638,416	-				+1.8
2,638,494	+				+0.6
2,638,830	+		LRK54_RS11905	0.14	+0.3
2,638,830	+		LRK54_RS11905	0.14	+1.1
2,638,830	+		LRK54_RS11905	0.14	+2.3
2,638,830	+		LRK54_RS11905	0.14	+1.8
2,638,831	-		LRK54_RS11905	0.14	+2.9
2,638,831	-		LRK54_RS11905	0.14	+2.8
2,638,831	-		LRK54_RS11905	0.14	+1.0
2,638,831	-		LRK54_RS11905	0.14	-0.5
2,638,831	-		LRK54_RS11905	0.14	+2.0
2,638,878	+		LRK54_RS11905	0.15	+1.7
2,638,878	+		LRK54_RS11905	0.15	+2.0
2,638,878	+		LRK54_RS11905	0.15	+0.8
2,638,879	-		LRK54_RS11905	0.15	+1.9
2,638,879	-		LRK54_RS11905	0.15	+2.2
2,638,879	-		LRK54_RS11905	0.15	+4.0
2,638,941	+		LRK54_RS11905	0.17	+2.2
2,638,941	+		LRK54_RS11905	0.17	+3.0
2,638,941	+		LRK54_RS11905	0.17	+1.8
2,638,941	+				+3.2
2,638,941	+		LRK54_RS11905	0.17	+2.1
2,638,941	+		LRK54_RS11905	0.17	+1.7
2,638,941	+		LRK54_RS11905	0.17	+1.5
2,638,941	+		LRK54_RS11905	0.17	+2.6
2,638,941	+		LRK54_RS11905	0.17	+1.4
2,638,941	+		LRK54_RS11905	0.17	+3.2
2,638,941	+		LRK54_RS11905	0.17	+0.6
2,638,942	-		LRK54_RS11905	0.17	+3.2
2,638,942	-		LRK54_RS11905	0.17	+2.0
2,638,942	-		LRK54_RS11905	0.17	+3.4
2,638,942	-		LRK54_RS11905	0.17	+1.1
2,638,942	-		LRK54_RS11905	0.17	+1.0
2,638,942	-		LRK54_RS11905	0.17	+3.0
2,638,942	-		LRK54_RS11905	0.17	+2.9
2,638,942	-		LRK54_RS11905	0.17	+2.3
2,638,942	-		LRK54_RS11905	0.17	+0.8
2,638,942	-		LRK54_RS11905	0.17	+3.5
2,638,942	-		LRK54_RS11905	0.17	+1.2
2,638,942	-		LRK54_RS11905	0.17	+2.6
2,638,942	-		LRK54_RS11905	0.17	+2.3
2,638,942	-		LRK54_RS11905	0.17	+2.1
2,638,942	-		LRK54_RS11905	0.17	+0.8
2,638,942	-		LRK54_RS11905	0.17	+2.5
2,638,942	-		LRK54_RS11905	0.17	+3.6
2,638,956	+		LRK54_RS11905	0.18	+0.6
2,638,956	+		LRK54_RS11905	0.18	-0.7
2,638,956	+		LRK54_RS11905	0.18	+1.8
2,638,956	+		LRK54_RS11905	0.18	+2.3
2,638,957	-		LRK54_RS11905	0.18	+1.2
2,638,957	-		LRK54_RS11905	0.18	+1.3
2,638,957	-		LRK54_RS11905	0.18	+1.8
2,639,070	+		LRK54_RS11905	0.21	+2.9
2,639,070	+		LRK54_RS11905	0.21	+2.2
2,639,070	+		LRK54_RS11905	0.21	+1.5
2,639,070	+		LRK54_RS11905	0.21	+1.3
2,639,130	+		LRK54_RS11905	0.23	-0.5
2,639,130	+		LRK54_RS11905	0.23	+0.1
2,639,131	-		LRK54_RS11905	0.23	+2.5
2,639,131	-		LRK54_RS11905	0.23	+1.3
2,639,131	-		LRK54_RS11905	0.23	+3.0
2,639,131	-		LRK54_RS11905	0.23	+3.9
2,639,151	+		LRK54_RS11905	0.24	+2.6
2,639,232	+		LRK54_RS11905	0.26	+1.3
2,639,232	+		LRK54_RS11905	0.26	+1.8
2,639,232	+		LRK54_RS11905	0.26	+0.7
2,639,232	+		LRK54_RS11905	0.26	+0.2
2,639,232	+		LRK54_RS11905	0.26	+0.8
2,639,232	+		LRK54_RS11905	0.26	+2.4
2,639,232	+		LRK54_RS11905	0.26	+1.6
2,639,232	+		LRK54_RS11905	0.26	+0.8
2,639,232	+		LRK54_RS11905	0.26	+1.8
2,639,232	+		LRK54_RS11905	0.26	+0.7
2,639,232	+		LRK54_RS11905	0.26	+2.9
2,639,232	+		LRK54_RS11905	0.26	+1.6
2,639,233	-		LRK54_RS11905	0.26	+2.3
2,639,233	-		LRK54_RS11905	0.26	+2.9
2,639,233	-		LRK54_RS11905	0.26	+0.6
2,639,233	-		LRK54_RS11905	0.26	+3.2
2,639,233	-		LRK54_RS11905	0.26	+0.2
2,639,233	-		LRK54_RS11905	0.26	+1.3
2,639,233	-		LRK54_RS11905	0.26	+2.2
2,639,233	-		LRK54_RS11905	0.26	+2.7
2,639,233	-		LRK54_RS11905	0.26	+2.6
2,639,233	-		LRK54_RS11905	0.26	+0.8
2,639,233	-		LRK54_RS11905	0.26	+1.6
2,639,233	-		LRK54_RS11905	0.26	+1.9
2,639,254	+		LRK54_RS11905	0.27	+1.8
2,639,254	+		LRK54_RS11905	0.27	+0.8
2,639,254	+		LRK54_RS11905	0.27	+1.6
2,639,254	+		LRK54_RS11905	0.27	+3.3
2,639,254	+		LRK54_RS11905	0.27	-0.5
2,639,255	-		LRK54_RS11905	0.27	+1.2
2,639,255	-		LRK54_RS11905	0.27	+1.5
2,639,255	-		LRK54_RS11905	0.27	+1.9
2,639,255	-		LRK54_RS11905	0.27	+1.2
2,639,370	+		LRK54_RS11905	0.31	+4.2
2,639,370	+		LRK54_RS11905	0.31	+0.3
2,639,370	+		LRK54_RS11905	0.31	+1.2
2,639,370	+		LRK54_RS11905	0.31	+1.7
2,639,370	+		LRK54_RS11905	0.31	+2.2
2,639,370	+		LRK54_RS11905	0.31	+2.3
2,639,370	+		LRK54_RS11905	0.31	+0.9
2,639,370	+		LRK54_RS11905	0.31	+3.2
2,639,370	+		LRK54_RS11905	0.31	+2.3
2,639,371	-		LRK54_RS11905	0.31	+2.3
2,639,371	-		LRK54_RS11905	0.31	+0.8
2,639,371	-		LRK54_RS11905	0.31	+2.1
2,639,371	-		LRK54_RS11905	0.31	+2.1
2,639,371	-		LRK54_RS11905	0.31	+1.8
2,639,371	-		LRK54_RS11905	0.31	+1.7
2,639,457	+		LRK54_RS11905	0.34	+1.0
2,639,457	+		LRK54_RS11905	0.34	+1.6
2,639,457	+		LRK54_RS11905	0.34	-0.0
2,639,457	+		LRK54_RS11905	0.34	+1.7
2,639,457	+		LRK54_RS11905	0.34	+1.7
2,639,457	+		LRK54_RS11905	0.34	+1.1
2,639,457	+		LRK54_RS11905	0.34	+2.1
2,639,457	+		LRK54_RS11905	0.34	+0.7
2,639,457	+		LRK54_RS11905	0.34	-2.3
2,639,457	+		LRK54_RS11905	0.34	+1.8
2,639,457	+		LRK54_RS11905	0.34	+0.6
2,639,458	-		LRK54_RS11905	0.34	-0.8
2,639,458	-		LRK54_RS11905	0.34	+1.9
2,639,458	-		LRK54_RS11905	0.34	+2.2
2,639,458	-		LRK54_RS11905	0.34	-0.5
2,639,458	-		LRK54_RS11905	0.34	+2.1
2,639,458	-		LRK54_RS11905	0.34	+2.6
2,639,458	-		LRK54_RS11905	0.34	+1.3
2,639,458	-		LRK54_RS11905	0.34	+2.0
2,639,458	-		LRK54_RS11905	0.34	+3.7
2,639,458	-		LRK54_RS11905	0.34	+0.6
2,639,458	-		LRK54_RS11905	0.34	+2.3
2,639,458	-		LRK54_RS11905	0.34	+2.3
2,639,458	-		LRK54_RS11905	0.34	+2.9
2,639,458	-		LRK54_RS11905	0.34	+2.4
2,639,541	+		LRK54_RS11905	0.36	+2.3
2,639,541	+		LRK54_RS11905	0.36	+0.2
2,639,541	+		LRK54_RS11905	0.36	+0.7
2,639,541	+		LRK54_RS11905	0.36	+2.7
2,639,541	+		LRK54_RS11905	0.36	+1.5
2,639,541	+		LRK54_RS11905	0.36	+1.1
2,639,541	+		LRK54_RS11905	0.36	+2.6
2,639,541	+		LRK54_RS11905	0.36	+0.5
2,639,541	+		LRK54_RS11905	0.36	+2.5
2,639,541	+		LRK54_RS11905	0.36	+3.4
2,639,541	+		LRK54_RS11905	0.36	+0.3
2,639,541	+		LRK54_RS11905	0.36	+2.1
2,639,541	+		LRK54_RS11905	0.36	+2.1
2,639,541	+		LRK54_RS11905	0.36	+1.9
2,639,541	+		LRK54_RS11905	0.36	+3.4
2,639,541	+		LRK54_RS11905	0.36	+1.3
2,639,541	+		LRK54_RS11905	0.36	+1.2
2,639,541	+		LRK54_RS11905	0.36	+2.3
2,639,541	+		LRK54_RS11905	0.36	+1.7
2,639,541	+		LRK54_RS11905	0.36	+1.0
2,639,541	+		LRK54_RS11905	0.36	+0.2
2,639,541	+		LRK54_RS11905	0.36	-0.8
2,639,541	+		LRK54_RS11905	0.36	+1.2
2,639,541	+		LRK54_RS11905	0.36	+3.0
2,639,542	-		LRK54_RS11905	0.36	+0.8
2,639,542	-		LRK54_RS11905	0.36	+0.3
2,639,542	-		LRK54_RS11905	0.36	+3.6
2,639,542	-		LRK54_RS11905	0.36	+2.3
2,639,542	-		LRK54_RS11905	0.36	+1.6
2,639,542	-		LRK54_RS11905	0.36	+1.9
2,639,542	-		LRK54_RS11905	0.36	+1.9
2,639,542	-		LRK54_RS11905	0.36	+2.6
2,639,542	-		LRK54_RS11905	0.36	+0.9
2,639,542	-		LRK54_RS11905	0.36	+1.8
2,639,542	-		LRK54_RS11905	0.36	+1.6
2,639,542	-		LRK54_RS11905	0.36	+1.2
2,639,542	-		LRK54_RS11905	0.36	+1.6
2,639,542	-		LRK54_RS11905	0.36	+1.7
2,639,542	-		LRK54_RS11905	0.36	+2.5
2,639,542	-		LRK54_RS11905	0.36	+2.2
2,639,542	-		LRK54_RS11905	0.36	+0.7
2,639,542	-		LRK54_RS11905	0.36	+0.8
2,639,542	-		LRK54_RS11905	0.36	+0.2
2,639,542	-		LRK54_RS11905	0.36	+2.2
2,639,542	-		LRK54_RS11905	0.36	+2.3
2,639,542	-		LRK54_RS11905	0.36	+1.3
2,639,542	-		LRK54_RS11905	0.36	-0.3
2,639,542	-		LRK54_RS11905	0.36	+3.2
2,639,542	-		LRK54_RS11905	0.36	+1.6
2,639,542	-		LRK54_RS11905	0.36	+1.9
2,639,542	-		LRK54_RS11905	0.36	+0.5
2,639,553	+		LRK54_RS11905	0.37	+1.6
2,639,554	-		LRK54_RS11905	0.37	+2.5
2,639,554	-		LRK54_RS11905	0.37	+1.4
2,639,670	+		LRK54_RS11905	0.41	-0.7
2,639,671	-		LRK54_RS11905	0.41	+3.2
2,640,060	+		LRK54_RS11905	0.53	+1.8
2,640,060	+		LRK54_RS11905	0.53	+2.8
2,640,060	+		LRK54_RS11905	0.53	+1.8
2,640,060	+		LRK54_RS11905	0.53	+2.3
2,640,061	-		LRK54_RS11905	0.53	+1.2
2,640,061	-		LRK54_RS11905	0.53	+1.4
2,640,210	+		LRK54_RS11905	0.58	+3.6
2,640,210	+		LRK54_RS11905	0.58	+0.8
2,640,210	+		LRK54_RS11905	0.58	+2.3
2,640,210	+		LRK54_RS11905	0.58	+0.3
2,640,210	+		LRK54_RS11905	0.58	+0.2
2,640,210	+		LRK54_RS11905	0.58	+2.7
2,640,210	+		LRK54_RS11905	0.58	+2.5
2,640,210	+		LRK54_RS11905	0.58	+2.6
2,640,210	+		LRK54_RS11905	0.58	+2.1
2,640,210	+		LRK54_RS11905	0.58	+2.2
2,640,210	+		LRK54_RS11905	0.58	+2.1
2,640,210	+		LRK54_RS11905	0.58	+1.7
2,640,210	+		LRK54_RS11905	0.58	+2.6
2,640,210	+		LRK54_RS11905	0.58	+1.9
2,640,210	+		LRK54_RS11905	0.58	+2.0
2,640,211	-		LRK54_RS11905	0.58	-1.1
2,640,211	-		LRK54_RS11905	0.58	+1.7
2,640,211	-		LRK54_RS11905	0.58	+2.3
2,640,211	-		LRK54_RS11905	0.58	+1.2
2,640,211	-		LRK54_RS11905	0.58	+1.3
2,640,211	-		LRK54_RS11905	0.58	+3.4
2,640,211	-		LRK54_RS11905	0.58	+1.8
2,640,211	-		LRK54_RS11905	0.58	-1.4
2,640,366	+		LRK54_RS11905	0.63	+1.8
2,640,366	+		LRK54_RS11905	0.63	+3.2
2,640,366	+		LRK54_RS11905	0.63	+1.2
2,640,366	+		LRK54_RS11905	0.63	+2.3
2,640,366	+		LRK54_RS11905	0.63	+5.0
2,640,366	+		LRK54_RS11905	0.63	+3.2
2,640,366	+		LRK54_RS11905	0.63	+2.8
2,640,366	+		LRK54_RS11905	0.63	+0.3
2,640,366	+		LRK54_RS11905	0.63	+0.8
2,640,366	+		LRK54_RS11905	0.63	+2.6
2,640,366	+		LRK54_RS11905	0.63	+3.6
2,640,366	+		LRK54_RS11905	0.63	+1.2
2,640,366	+		LRK54_RS11905	0.63	+2.3
2,640,366	+		LRK54_RS11905	0.63	+2.2
2,640,366	+		LRK54_RS11905	0.63	+2.7
2,640,366	+		LRK54_RS11905	0.63	+1.2
2,640,366	+		LRK54_RS11905	0.63	+2.1
2,640,366	+		LRK54_RS11905	0.63	+3.7
2,640,366	+		LRK54_RS11905	0.63	+1.8
2,640,366	+		LRK54_RS11905	0.63	+2.2
2,640,366	+		LRK54_RS11905	0.63	+2.1
2,640,366	+		LRK54_RS11905	0.63	-0.2
2,640,366	+		LRK54_RS11905	0.63	+4.3
2,640,366	+		LRK54_RS11905	0.63	+1.5
2,640,366	+		LRK54_RS11905	0.63	+2.6
2,640,366	+		LRK54_RS11905	0.63	+0.2
2,640,366	+		LRK54_RS11905	0.63	+1.2
2,640,366	+		LRK54_RS11905	0.63	+0.6
2,640,366	+		LRK54_RS11905	0.63	+0.1
2,640,367	-		LRK54_RS11905	0.63	+2.9
2,640,367	-		LRK54_RS11905	0.63	+2.2
2,640,367	-		LRK54_RS11905	0.63	+1.1
2,640,367	-		LRK54_RS11905	0.63	+3.2
2,640,367	-		LRK54_RS11905	0.63	+3.2
2,640,367	-		LRK54_RS11905	0.63	+1.7
2,640,367	-		LRK54_RS11905	0.63	+1.4
2,640,367	-		LRK54_RS11905	0.63	-1.1
2,640,367	-		LRK54_RS11905	0.63	+1.8
2,640,367	-		LRK54_RS11905	0.63	+1.5
2,640,367	-		LRK54_RS11905	0.63	+2.5
2,640,367	-		LRK54_RS11905	0.63	+4.2
2,640,367	-		LRK54_RS11905	0.63	+0.3
2,640,367	-		LRK54_RS11905	0.63	+3.3
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2,642,115	-				-1.9
2,642,115	-				-0.1
2,642,115	-				+0.2
2,642,115	-				+0.6
2,642,115	-				+3.2
2,642,115	-				-0.9
2,642,115	-				+0.8
2,642,115	-				-0.0
2,642,115	-				+0.2
2,642,186	+				-1.0
2,642,186	+				+1.2
2,642,186	+				-0.5
2,642,186	+				+0.9
2,642,186	+				-2.4
2,642,186	+				-2.1
2,642,186	+				-1.5
2,642,186	+				-4.6
2,642,186	+				-0.6
2,642,186	+				-1.2
2,642,186	+				-1.1
2,642,187	-				+0.4
2,642,187	-				-1.0
2,642,187	-				-0.0
2,642,187	-				-0.6
2,642,187	-				+0.8
2,642,187	-				-0.7
2,642,187	-				-1.7
2,642,187	-				-0.6
2,642,187	-				-1.1
2,642,187	-				-0.6
2,642,187	-				-2.4
2,642,201	+				-1.6
2,642,201	+				+1.6
2,642,201	+				+1.0
2,642,201	+				-0.9
2,642,201	+				+0.8
2,642,202	-				+0.1
2,642,202	-				+0.6
2,642,202	-				-0.2
2,642,202	-				+1.4
2,642,202	-				-0.7
2,642,202	-				+0.2
2,642,202	-				-0.7
2,642,202	-				+2.2
2,642,279	+		LRK54_RS11915	0.12	-0.2
2,642,279	+		LRK54_RS11915	0.12	-0.7
2,642,279	+		LRK54_RS11915	0.12	-0.5
2,642,279	+		LRK54_RS11915	0.12	+0.2
2,642,279	+		LRK54_RS11915	0.12	-1.3
2,642,279	+		LRK54_RS11915	0.12	-1.2
2,642,279	+		LRK54_RS11915	0.12	+0.3
2,642,279	+		LRK54_RS11915	0.12	+0.6
2,642,280	-		LRK54_RS11915	0.12	-1.5
2,642,280	-		LRK54_RS11915	0.12	-1.8
2,642,280	-		LRK54_RS11915	0.12	-0.3
2,642,280	-		LRK54_RS11915	0.12	+0.2
2,642,280	-		LRK54_RS11915	0.12	+0.8
2,642,280	-		LRK54_RS11915	0.12	-0.8
2,642,280	-		LRK54_RS11915	0.12	-1.6
2,642,280	-		LRK54_RS11915	0.12	-0.5
2,642,280	-		LRK54_RS11915	0.12	-0.5
2,642,375	+		LRK54_RS11915	0.18	-0.0
2,642,375	+		LRK54_RS11915	0.18	-2.6