Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS00575

Experiment: R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM
118,467	-		LRK54_RS00570	0.35	+1.8
118,467	-		LRK54_RS00570	0.35	+0.1
118,521	+		LRK54_RS00570	0.39	-1.9
118,521	+		LRK54_RS00570	0.39	-0.3
118,521	+		LRK54_RS00570	0.39	-1.0
118,521	+		LRK54_RS00570	0.39	+1.1
118,521	+		LRK54_RS00570	0.39	-2.6
118,521	+		LRK54_RS00570	0.39	-2.0
118,521	+		LRK54_RS00570	0.39	-3.0
118,521	+		LRK54_RS00570	0.39	+2.1
118,521	+		LRK54_RS00570	0.39	+1.1
118,521	+		LRK54_RS00570	0.39	+1.3
118,521	+		LRK54_RS00570	0.39	+1.6
118,521	+		LRK54_RS00570	0.39	-3.5
118,521	+		LRK54_RS00570	0.39	-2.5
118,521	+		LRK54_RS00570	0.39	+0.4
118,521	+		LRK54_RS00570	0.39	-0.6
118,521	+		LRK54_RS00570	0.39	-0.9
118,521	+		LRK54_RS00570	0.39	-0.4
118,522	-		LRK54_RS00570	0.39	-1.9
118,522	-		LRK54_RS00570	0.39	-1.4
118,522	-		LRK54_RS00570	0.39	-0.9
118,522	-		LRK54_RS00570	0.39	-3.3
118,522	-		LRK54_RS00570	0.39	+0.0
118,522	-		LRK54_RS00570	0.39	+1.1
118,522	-		LRK54_RS00570	0.39	+1.1
118,522	-		LRK54_RS00570	0.39	-0.4
118,522	-		LRK54_RS00570	0.39	-0.0
118,522	-		LRK54_RS00570	0.39	+1.1
118,522	-		LRK54_RS00570	0.39	+1.1
118,522	-		LRK54_RS00570	0.39	-0.7
118,522	-		LRK54_RS00570	0.39	-2.4
118,522	-		LRK54_RS00570	0.39	+0.1
118,522	-		LRK54_RS00570	0.39	+1.0
118,533	+		LRK54_RS00570	0.40	-1.6
118,533	+		LRK54_RS00570	0.40	-2.7
118,533	+		LRK54_RS00570	0.40	+1.6
118,533	+		LRK54_RS00570	0.40	-2.2
118,533	+		LRK54_RS00570	0.40	-1.9
118,533	+		LRK54_RS00570	0.40	-0.9
118,533	+		LRK54_RS00570	0.40	-1.4
118,533	+		LRK54_RS00570	0.40	-1.0
118,533	+		LRK54_RS00570	0.40	-0.6
118,533	+		LRK54_RS00570	0.40	+0.8
118,533	+		LRK54_RS00570	0.40	-1.4
118,534	-		LRK54_RS00570	0.40	+1.1
118,534	-		LRK54_RS00570	0.40	+1.3
118,534	-		LRK54_RS00570	0.40	-1.8
118,534	-		LRK54_RS00570	0.40	-0.9
118,534	-		LRK54_RS00570	0.40	-2.7
118,534	-		LRK54_RS00570	0.40	+1.6
118,534	-		LRK54_RS00570	0.40	-0.6
118,534	-		LRK54_RS00570	0.40	-2.4
118,534	-		LRK54_RS00570	0.40	+0.3
118,534	-		LRK54_RS00570	0.40	-1.2
118,534	-		LRK54_RS00570	0.40	+1.1
118,534	-		LRK54_RS00570	0.40	-0.9
118,534	-		LRK54_RS00570	0.40	-1.1
118,534	-		LRK54_RS00570	0.40	-1.4
118,534	-		LRK54_RS00570	0.40	-1.7
118,758	+		LRK54_RS00570	0.58	-1.1
118,758	+		LRK54_RS00570	0.58	-1.2
118,758	+		LRK54_RS00570	0.58	+0.8
118,758	+		LRK54_RS00570	0.58	+0.7
118,758	+		LRK54_RS00570	0.58	+1.1
118,758	+		LRK54_RS00570	0.58	+0.7
118,759	-		LRK54_RS00570	0.58	+1.1
118,759	-		LRK54_RS00570	0.58	-0.6
118,759	-		LRK54_RS00570	0.58	-0.1
118,759	-		LRK54_RS00570	0.58	+0.6
118,759	-		LRK54_RS00570	0.58	+2.1
118,759	-		LRK54_RS00570	0.58	-1.4
118,759	-		LRK54_RS00570	0.58	+2.4
118,759	-		LRK54_RS00570	0.58	-0.0
118,759	-		LRK54_RS00570	0.58	+3.1
118,989	+		LRK54_RS00570	0.76	+0.6
118,990	-		LRK54_RS00570	0.77	+1.1
118,990	-		LRK54_RS00570	0.77	-1.1
118,990	-		LRK54_RS00570	0.77	+0.7
118,990	-		LRK54_RS00570	0.77	-0.9
118,990	-		LRK54_RS00570	0.77	+1.8
119,257	-				-0.5
119,257	-				+1.3
119,341	+				-0.9
119,341	+				-0.7
119,341	+				-0.0
119,341	+				-2.4
119,341	+				-1.9
119,341	+				+1.0
119,341	+				-1.9
119,341	+				-2.1
119,341	+				+1.7
119,341	+				-1.4
119,342	-				-0.4
119,342	-				-2.1
119,342	-				-1.7
119,342	-				-0.6
119,342	-				+0.8
119,342	-				-1.2
119,342	-				+0.3
120,163	-		LRK54_RS00575	0.74	-2.1
120,500	-				+1.0
120,508	+				-1.7
120,508	+				+1.4
120,508	+				+1.6
120,508	+				+0.3
120,508	+				-0.1
120,509	-				-0.9
120,509	-				-1.6
120,509	-				+1.6
120,509	-				-1.2
120,509	-				-0.2
120,509	-				+0.3
120,509	-				-1.9
120,509	-				-0.6
120,553	+				+1.1
120,553	+				+1.1
120,553	+				+0.3
120,553	+				-0.1
120,553	+				-1.0
120,553	+				+0.3
120,553	+				-0.0
120,553	+				-1.0
120,553	+				+0.1
120,553	+				-0.9
120,553	+				+1.1
120,553	+				-1.9
120,553	+				-2.3
120,553	+				+0.1
120,553	+				-1.4
120,553	+				-1.9
120,553	+				-2.0
120,553	+				+3.1
120,553	+				-0.9
120,553	+				-1.3
120,553	+				+1.7
120,553	+				-1.1
120,553	+				-0.4
120,553	+				+1.6
120,553	+				-1.9
120,553	+				+1.1
120,553	+				-0.6
120,553	+				+0.3
120,553	+				-0.0
120,553	+				+0.2
120,553	+				-0.2
120,553	+				+3.1
120,553	+				-2.5
120,553	+				-0.5
120,553	+				-0.2
120,553	+				+0.5
120,554	-				-0.0
120,554	-				-0.7
120,554	-				+1.1
120,554	-				-0.7
120,554	-				+1.8
120,554	-				+0.6
120,554	-				-0.8
120,554	-				+0.6
120,554	-				-0.8
120,554	-				-1.9
120,554	-				-0.5
120,554	-				+0.4
120,554	-				-0.7
120,554	-				-1.1
120,554	-				-1.5
120,554	-				-1.3
120,554	-				-0.7
120,554	-				+0.9
120,554	-				-2.0
120,554	-				-0.8
120,554	-				-0.9
120,554	-				-1.6
120,554	-				+2.1
120,554	-				+3.1
120,554	-				-1.1
120,554	-				-0.3
120,554	-				-0.4
120,554	-				+0.8
120,554	-				-2.3
120,554	-				+1.8
120,554	-				+1.1
120,554	-				-2.2
120,554	-				-0.1
120,554	-				+2.1
120,554	-				-1.2
120,554	-				-1.1
120,554	-				-1.6
120,554	-				+1.6
120,554	-				-0.6
120,597	+				-1.6
120,597	+				-1.2
120,597	+				+1.6
120,597	+				-1.5
120,597	+				-1.0
120,597	+				-0.0
120,598	-				-0.0
120,598	-				+0.6
120,598	-				-0.8
120,598	-				+0.1
120,598	-				+1.1
120,598	-				-0.6
120,986	+		LRK54_RS00580	0.72	+0.6
120,986	+		LRK54_RS00580	0.72	-2.1
120,986	+		LRK54_RS00580	0.72	-2.6
120,986	+		LRK54_RS00580	0.72	+2.1
120,986	+		LRK54_RS00580	0.72	-0.4
120,986	+		LRK54_RS00580	0.72	+1.1
120,986	+		LRK54_RS00580	0.72	-1.7
120,986	+		LRK54_RS00580	0.72	-0.3
120,986	+		LRK54_RS00580	0.72	-0.4
120,986	+		LRK54_RS00580	0.72	+0.1
120,987	-		LRK54_RS00580	0.72	+0.2
120,987	-		LRK54_RS00580	0.72	+0.6
120,987	-		LRK54_RS00580	0.72	-2.3
120,987	-		LRK54_RS00580	0.72	-1.9
120,987	-		LRK54_RS00580	0.72	-0.3
120,987	-		LRK54_RS00580	0.72	+0.1
120,987	-		LRK54_RS00580	0.72	-1.9
120,987	-		LRK54_RS00580	0.72	-2.7
120,992	+		LRK54_RS00580	0.73	-1.0
120,992	+		LRK54_RS00580	0.73	-1.4
120,992	+		LRK54_RS00580	0.73	-0.1
120,992	+		LRK54_RS00580	0.73	+0.1
120,993	-		LRK54_RS00580	0.74	-2.9
121,043	+		LRK54_RS00580	0.88	+0.6
121,043	+		LRK54_RS00580	0.88	-0.3
121,178	+				+1.6
121,178	+				+0.3
121,178	+				-1.4
121,178	+				-1.2
121,178	+				-0.1
121,178	+				-1.8
121,178	+				+0.1
121,178	+				-1.0
121,178	+				+0.6
121,178	+				+0.2
121,178	+				-2.3
121,178	+				-0.7
121,178	+				-2.1
121,179	-				-2.3
121,179	-				-1.3
121,179	-				+2.0
121,179	-				-1.6
121,179	-				+0.8
121,179	-				-0.2
121,179	-				+1.5
121,179	-				+0.8
121,179	-				+0.6
121,179	-				+0.4
121,179	-				-1.1
121,179	-				-1.6
121,179	-				+1.6
121,179	-				-1.6