Strain Fitness in Shewanella loihica PV-4 around Shew_2961

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,512,537	+		Shew_2960	0.83	+0.1
3,513,232	-				+0.3
3,513,259	-				+0.2
3,513,289	-				+0.4
3,513,501	+		Shew_2961	0.18	+0.5
3,513,509	-		Shew_2961	0.21	-0.5
3,513,509	-		Shew_2961	0.21	-0.1
3,513,509	-		Shew_2961	0.21	+0.0
3,513,509	-		Shew_2961	0.21	-1.9
3,513,706	+				-0.2
3,514,021	+				+1.5
3,514,302	-		Shew_2962	0.19	+1.3