Strain Fitness in Shewanella loihica PV-4 around Shew_2529

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
2,983,059	+		Shew_2528	0.34	-0.4
2,983,496	+		Shew_2528	0.71	+0.4
2,983,496	+		Shew_2528	0.71	+0.1
2,983,780	+				-0.3
2,983,848	+				-0.1
2,983,848	+				+0.3
2,983,881	-				-0.1
2,983,978	+				+0.6
2,984,050	+				+0.5
2,984,246	-		Shew_2529	0.21	+0.3
2,984,303	-		Shew_2529	0.24	-2.8
2,984,309	+		Shew_2529	0.24	-0.5
2,984,317	-		Shew_2529	0.25	-1.6
2,984,381	+		Shew_2529	0.28	-0.3
2,984,609	-		Shew_2529	0.42	-1.3
2,984,823	+		Shew_2529	0.54	-0.3
2,984,911	+		Shew_2529	0.59	+0.4
2,985,578	-				-1.9
2,985,626	+				+0.2
2,985,823	-				+1.3
2,986,033	+		Shew_2530	0.29	-0.3
2,986,164	+		Shew_2530	0.42	-0.2
2,986,164	+		Shew_2530	0.42	-0.2
2,986,582	+		Shew_2530	0.85	+0.2