Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS07540

Experiment: Growth with Chloride 200 mM; with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Growth with Chloride 200 mM; with MOPS
1,674,019	+		PFLU_RS07530	0.87	-1.1
1,674,019	+		PFLU_RS07530	0.87	-0.5
1,674,020	-		PFLU_RS07530	0.87	+2.7
1,674,046	+		PFLU_RS07530	0.88	+0.4
1,674,046	+		PFLU_RS07530	0.88	-2.8
1,674,046	+		PFLU_RS07530	0.88	+2.0
1,674,046	+		PFLU_RS07530	0.88	+0.7
1,674,046	+		PFLU_RS07530	0.88	+1.7
1,674,046	+		PFLU_RS07530	0.88	-0.2
1,674,046	+		PFLU_RS07530	0.88	+0.6
1,674,046	+		PFLU_RS07530	0.88	-0.1
1,674,046	+		PFLU_RS07530	0.88	+2.3
1,674,046	+		PFLU_RS07530	0.88	-0.8
1,674,046	+		PFLU_RS07530	0.88	+0.1
1,674,046	+		PFLU_RS07530	0.88	+2.0
1,674,046	+		PFLU_RS07530	0.88	-1.2
1,674,047	-		PFLU_RS07530	0.88	+2.1
1,674,047	-		PFLU_RS07530	0.88	-0.3
1,674,047	-		PFLU_RS07530	0.88	-0.2
1,674,047	-		PFLU_RS07530	0.88	+0.8
1,674,047	-		PFLU_RS07530	0.88	+0.1
1,674,047	-		PFLU_RS07530	0.88	-0.6
1,674,047	-		PFLU_RS07530	0.88	-0.2
1,674,049	+		PFLU_RS07530	0.89	-0.1
1,674,049	+		PFLU_RS07530	0.89	+1.3
1,674,049	+		PFLU_RS07530	0.89	+0.4
1,674,049	+		PFLU_RS07530	0.89	-1.2
1,674,049	+		PFLU_RS07530	0.89	+1.2
1,674,049	+		PFLU_RS07530	0.89	-0.9
1,674,049	+		PFLU_RS07530	0.89	-2.3
1,674,049	+		PFLU_RS07530	0.89	-0.2
1,674,050	-		PFLU_RS07530	0.89	+1.7
1,674,050	-		PFLU_RS07530	0.89	+0.1
1,674,050	-		PFLU_RS07530	0.89	-0.6
1,674,050	-		PFLU_RS07530	0.89	+0.3
1,674,050	-		PFLU_RS07530	0.89	+0.8
1,674,050	-		PFLU_RS07530	0.89	+0.1
1,674,055	+		PFLU_RS07530	0.89	-0.7
1,674,056	-		PFLU_RS07530	0.89	-0.2
1,674,187	+				-0.3
1,674,229	+				+1.2
1,674,229	+				+1.1
1,674,229	+				+0.8
1,674,229	+				-2.5
1,674,229	+				-1.4
1,674,230	-				+2.1
1,674,230	-				-2.8
1,674,273	+				-1.0
1,674,274	-				+0.6
1,674,275	+				+0.9
1,674,275	+				-1.1
1,674,275	+				-0.5
1,674,275	+				+0.1
1,674,275	+				-0.3
1,674,275	+				+1.1
1,674,275	+				-0.4
1,674,275	+				-0.6
1,674,275	+				+0.5
1,674,275	+				+1.4
1,674,275	+				+0.1
1,674,275	+				+0.1
1,674,275	+				+0.1
1,674,275	+				-0.3
1,674,275	+				-2.2
1,674,275	+				+1.4
1,674,275	+				-2.1
1,674,275	+				+0.2
1,674,275	+				+1.6
1,674,276	-				+1.0
1,674,276	-				-0.1
1,674,276	-				+0.1
1,674,276	-				-0.2
1,674,276	-				+0.9
1,674,276	-				-1.4
1,674,276	-				-1.9
1,674,276	-				+0.4
1,674,276	-				-1.3
1,674,276	-				+0.6
1,674,276	-				-0.9
1,674,276	-				+2.7
1,674,276	-				-0.9
1,674,276	-				-1.5
1,674,276	-				+0.1
1,674,276	-				+2.1
1,674,276	-				+1.0
1,674,276	-				-0.6
1,674,276	-				-1.4
1,674,276	-				-2.1
1,674,276	-				-0.5
1,674,276	-				-1.2
1,674,276	-				-1.9
1,674,276	-				-1.2
1,674,276	-				-1.0
1,674,276	-				+0.2
1,674,276	-				+0.9
1,674,276	-				-0.9
1,674,276	-				+2.8
1,674,276	-				-1.6
1,674,276	-				-1.4
1,674,276	-				+0.5
1,674,276	-				-1.2
1,674,276	-				-0.2
1,674,286	+				+1.2
1,674,286	+				-0.4
1,674,286	+				-0.2
1,674,286	+				-0.0
1,674,286	+				+1.4
1,674,286	+				+0.4
1,674,287	-				+1.4
1,674,293	+				-0.4
1,674,293	+				+0.7
1,674,294	-				+0.9
1,674,294	-				-3.1
1,674,342	+				-1.5
1,674,347	+				-2.7
1,674,363	+		PFLU_RS07535	0.11	-0.4
1,674,363	+		PFLU_RS07535	0.11	+2.1
1,674,363	+		PFLU_RS07535	0.11	-0.0
1,674,363	+		PFLU_RS07535	0.11	-2.1
1,674,364	-		PFLU_RS07535	0.11	-0.6
1,674,364	-		PFLU_RS07535	0.11	-0.7
1,674,396	+		PFLU_RS07535	0.17	-0.7
1,674,396	+		PFLU_RS07535	0.17	-0.3
1,674,396	+		PFLU_RS07535	0.17	+0.1
1,674,396	+		PFLU_RS07535	0.17	-1.8
1,674,397	-		PFLU_RS07535	0.17	-0.3
1,674,397	-		PFLU_RS07535	0.17	-0.4
1,674,397	-		PFLU_RS07535	0.17	-1.0
1,674,397	-		PFLU_RS07535	0.17	-0.2
1,674,397	-		PFLU_RS07535	0.17	-0.3
1,674,417	+		PFLU_RS07535	0.21	-2.1
1,674,418	-		PFLU_RS07535	0.21	-2.1
1,674,418	-		PFLU_RS07535	0.21	-0.0
1,674,645	+		PFLU_RS07535	0.63	-0.2
1,674,645	+		PFLU_RS07535	0.63	-0.8
1,674,645	+		PFLU_RS07535	0.63	+0.6
1,674,645	+		PFLU_RS07535	0.63	-1.7
1,674,645	+		PFLU_RS07535	0.63	-2.2
1,674,645	+		PFLU_RS07535	0.63	-1.6
1,674,645	+		PFLU_RS07535	0.63	+0.6
1,674,645	+		PFLU_RS07535	0.63	-0.9
1,674,645	+		PFLU_RS07535	0.63	-1.2
1,674,645	+		PFLU_RS07535	0.63	-1.6
1,674,645	+		PFLU_RS07535	0.63	-1.9
1,674,645	+		PFLU_RS07535	0.63	+0.4
1,674,645	+		PFLU_RS07535	0.63	+0.7
1,674,645	+		PFLU_RS07535	0.63	-0.1
1,674,645	+		PFLU_RS07535	0.63	-2.0
1,674,645	+		PFLU_RS07535	0.63	-2.6
1,674,645	+		PFLU_RS07535	0.63	+0.4
1,674,645	+		PFLU_RS07535	0.63	-0.4
1,674,645	+		PFLU_RS07535	0.63	-0.2
1,674,646	-		PFLU_RS07535	0.63	-1.2
1,674,646	-		PFLU_RS07535	0.63	-0.1
1,674,646	-		PFLU_RS07535	0.63	-1.2
1,674,646	-		PFLU_RS07535	0.63	-0.5
1,674,646	-		PFLU_RS07535	0.63	-0.9
1,674,646	-		PFLU_RS07535	0.63	+1.1
1,674,646	-		PFLU_RS07535	0.63	+1.0
1,674,646	-		PFLU_RS07535	0.63	-1.2
1,674,646	-		PFLU_RS07535	0.63	-0.7
1,674,646	-		PFLU_RS07535	0.63	-1.5
1,674,646	-		PFLU_RS07535	0.63	-0.1
1,674,646	-		PFLU_RS07535	0.63	-0.2
1,674,646	-		PFLU_RS07535	0.63	-2.1
1,674,646	-		PFLU_RS07535	0.63	-1.2
1,674,646	-		PFLU_RS07535	0.63	-0.1
1,674,646	-		PFLU_RS07535	0.63	-0.5
1,674,646	-		PFLU_RS07535	0.63	-2.8
1,674,646	-		PFLU_RS07535	0.63	-0.9
1,674,646	-		PFLU_RS07535	0.63	+0.4
1,674,646	-		PFLU_RS07535	0.63	-0.3
1,674,646	-		PFLU_RS07535	0.63	-2.2
1,674,646	-		PFLU_RS07535	0.63	+0.2
1,674,646	-		PFLU_RS07535	0.63	-0.4
1,674,646	-		PFLU_RS07535	0.63	-1.2
1,674,646	-		PFLU_RS07535	0.63	-0.9
1,674,646	-		PFLU_RS07535	0.63	-0.9
1,674,646	-		PFLU_RS07535	0.63	-1.4
1,674,646	-		PFLU_RS07535	0.63	-1.4
1,674,646	-		PFLU_RS07535	0.63	+2.3
1,674,646	-		PFLU_RS07535	0.63	-3.9
1,674,646	-		PFLU_RS07535	0.63	-2.1
1,674,669	+		PFLU_RS07535	0.68	-0.8
1,674,669	+		PFLU_RS07535	0.68	-1.7
1,674,669	+		PFLU_RS07535	0.68	-2.7
1,674,669	+		PFLU_RS07535	0.68	-1.6
1,674,669	+		PFLU_RS07535	0.68	-0.6
1,674,669	+		PFLU_RS07535	0.68	+0.8
1,674,669	+		PFLU_RS07535	0.68	-0.3
1,674,669	+		PFLU_RS07535	0.68	+0.2
1,674,669	+		PFLU_RS07535	0.68	-0.2
1,674,669	+		PFLU_RS07535	0.68	+0.4
1,674,669	+		PFLU_RS07535	0.68	-0.2
1,674,670	-		PFLU_RS07535	0.68	-0.2
1,674,670	-		PFLU_RS07535	0.68	-1.3
1,674,670	-		PFLU_RS07535	0.68	+1.4
1,674,670	-		PFLU_RS07535	0.68	+0.1
1,674,670	-		PFLU_RS07535	0.68	-0.7
1,674,670	-		PFLU_RS07535	0.68	-0.8
1,674,670	-		PFLU_RS07535	0.68	+0.8
1,674,670	-		PFLU_RS07535	0.68	-1.1
1,674,670	-		PFLU_RS07535	0.68	-1.2
1,674,670	-		PFLU_RS07535	0.68	+0.9
1,674,818	+				-0.5
1,674,819	-				-1.6
1,674,819	-				+0.3
1,674,826	+				-1.3
1,674,826	+				-2.1
1,674,826	+				+1.4
1,674,826	+				+1.0
1,674,827	-				+1.0
1,674,827	-				-3.1
1,674,827	-				+2.1
1,674,827	-				+0.3
1,674,827	-				-0.1
1,674,827	-				-1.4
1,674,841	-				+2.1
1,674,883	+				+0.2
1,674,884	-				+0.1
1,674,884	-				-0.2
1,674,884	-				-0.0
1,674,884	-				+0.7
1,674,993	+		PFLU_RS07540	0.15	-1.4
1,675,233	+		PFLU_RS07540	0.46	-2.3
1,675,419	+		PFLU_RS07540	0.70	+0.9
1,675,419	+		PFLU_RS07540	0.70	-2.7
1,675,419	+		PFLU_RS07540	0.70	-2.5
1,675,653	+				-0.2
1,675,673	+				+0.6
1,675,674	-				-2.1
1,675,674	-				-0.3
1,675,732	+		PFLU_RS07545	0.13	+2.4
1,675,733	-		PFLU_RS07545	0.13	+0.6
1,675,733	-		PFLU_RS07545	0.13	+0.5
1,675,733	-		PFLU_RS07545	0.13	-1.9
1,675,733	-		PFLU_RS07545	0.13	+0.4
1,675,742	+		PFLU_RS07545	0.15	+0.8
1,675,742	+		PFLU_RS07545	0.15	-0.2
1,675,853	+		PFLU_RS07545	0.35	-1.0
1,675,854	-		PFLU_RS07545	0.36	-1.1
1,675,854	-		PFLU_RS07545	0.36	+0.9
1,675,964	+		PFLU_RS07545	0.56	+0.7
1,675,964	+		PFLU_RS07545	0.56	-0.2
1,675,964	+		PFLU_RS07545	0.56	+1.3
1,675,964	+		PFLU_RS07545	0.56	-1.4
1,675,965	-		PFLU_RS07545	0.56	+0.8
1,675,965	-		PFLU_RS07545	0.56	+0.4
1,675,965	-		PFLU_RS07545	0.56	+0.4
1,675,965	-		PFLU_RS07545	0.56	+2.3
1,675,965	-		PFLU_RS07545	0.56	-0.9
1,676,030	+		PFLU_RS07545	0.68	-2.1
1,676,030	+		PFLU_RS07545	0.68	-2.3
1,676,030	+		PFLU_RS07545	0.68	-2.7
1,676,031	-		PFLU_RS07545	0.68	-0.3
1,676,031	-		PFLU_RS07545	0.68	+0.1
1,676,036	+		PFLU_RS07545	0.69	-2.5
1,676,036	+		PFLU_RS07545	0.69	-0.8
1,676,036	+		PFLU_RS07545	0.69	-0.1
1,676,036	+		PFLU_RS07545	0.69	+0.3
1,676,036	+		PFLU_RS07545	0.69	+1.0
1,676,036	+		PFLU_RS07545	0.69	+1.7
1,676,036	+		PFLU_RS07545	0.69	-0.1
1,676,036	+		PFLU_RS07545	0.69	-1.8
1,676,036	+		PFLU_RS07545	0.69	+0.6
1,676,037	-		PFLU_RS07545	0.69	+1.3
1,676,037	-		PFLU_RS07545	0.69	+0.0
1,676,037	-		PFLU_RS07545	0.69	-0.2
1,676,139	+		PFLU_RS07545	0.88	+0.5
1,676,139	+		PFLU_RS07545	0.88	-1.1
1,676,140	-		PFLU_RS07545	0.88	-0.4
1,676,140	-		PFLU_RS07545	0.88	+0.1
1,676,202	-				+0.5
1,676,264	+				+1.3
1,676,264	+				-1.6
1,676,264	+				-1.2
1,676,264	+				-1.2
1,676,264	+				-0.9
1,676,264	+				-1.8
1,676,264	+				+1.0
1,676,264	+				+1.6
1,676,264	+				+0.9
1,676,265	-				-1.8
1,676,265	-				-1.4
1,676,265	-				+1.1
1,676,265	-				-0.1
1,676,265	-				+1.0
1,676,265	-				-2.6
1,676,265	-				+1.5
1,676,265	-				+0.3
1,676,265	-				+0.7
1,676,265	-				-0.2
1,676,265	-				+1.1
1,676,265	-				+0.2
1,676,316	+				+1.2
1,676,316	+				+0.7
1,676,380	+				-1.6
1,676,645	+		PFLU_RS07550	0.34	+0.1
1,676,646	-		PFLU_RS07550	0.34	+1.4