Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0806

Experiment: KB with Flavone 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Flavone 0.125 mg/ml
910,968	+		Psyr_0805	0.13	-0.8
910,968	+		Psyr_0805	0.13	-0.5
911,022	+		Psyr_0805	0.18	-0.0
911,022	+		Psyr_0805	0.18	-0.6
911,023	-		Psyr_0805	0.18	+0.5
911,023	-		Psyr_0805	0.18	-0.3
911,023	-		Psyr_0805	0.18	-0.4
911,023	-		Psyr_0805	0.18	+0.2
911,068	+		Psyr_0805	0.22	-0.2
911,068	+		Psyr_0805	0.22	-0.7
911,068	+		Psyr_0805	0.22	+0.9
911,068	+		Psyr_0805	0.22	+0.1
911,069	-		Psyr_0805	0.22	+2.3
911,069	-		Psyr_0805	0.22	-0.5
911,069	-		Psyr_0805	0.22	-1.1
911,069	-		Psyr_0805	0.22	+0.7
911,069	-		Psyr_0805	0.22	-2.1
911,069	-		Psyr_0805	0.22	-0.1
911,069	-		Psyr_0805	0.22	-0.4
911,069	-		Psyr_0805	0.22	-0.1
911,069	-		Psyr_0805	0.22	-1.5
911,240	+		Psyr_0805	0.38	-1.4
911,241	-		Psyr_0805	0.38	-1.4
911,495	+		Psyr_0805	0.61	-1.2
911,495	+		Psyr_0805	0.61	-2.0
911,535	+		Psyr_0805	0.65	+0.1
911,536	-		Psyr_0805	0.65	-0.5
911,536	-		Psyr_0805	0.65	-0.2
911,612	+		Psyr_0805	0.72	+0.6
911,612	+		Psyr_0805	0.72	+1.1
911,612	+		Psyr_0805	0.72	-0.7
911,612	+		Psyr_0805	0.72	-1.5
911,612	+		Psyr_0805	0.72	+0.5
911,612	+		Psyr_0805	0.72	+1.1
911,613	-		Psyr_0805	0.72	+0.7
911,613	-		Psyr_0805	0.72	+1.3
911,613	-		Psyr_0805	0.72	-0.8
911,613	-		Psyr_0805	0.72	+0.3
911,711	+		Psyr_0805	0.81	-1.1
911,712	-		Psyr_0805	0.81	+0.6
911,712	-		Psyr_0805	0.81	-0.4
911,712	-		Psyr_0805	0.81	+1.7
911,712	-		Psyr_0805	0.81	-1.8
911,782	+		Psyr_0805	0.87	+0.5
911,782	+		Psyr_0805	0.87	-0.2
911,783	-		Psyr_0805	0.88	-0.0
911,783	-		Psyr_0805	0.88	+0.8
911,783	-		Psyr_0805	0.88	+0.5
911,783	-		Psyr_0805	0.88	+0.0
911,783	-		Psyr_0805	0.88	-0.0
911,783	-		Psyr_0805	0.88	+0.7
911,916	+				-0.6
911,916	+				+0.0
911,916	+				-0.2
911,917	-				-0.7
911,917	-				+0.6
911,917	-				+0.7
911,925	+				-0.7
911,925	+				-0.0
911,957	+				-2.5
911,957	+				-1.1
911,957	+				+0.5
911,957	+				-0.0
911,957	+				+0.5
911,957	+				-0.5
911,957	+				+1.6
911,957	+				-1.5
911,957	+				-0.9
911,958	-				+0.1
911,958	-				+0.2
911,958	-				+1.3
911,958	-				-0.6
911,958	-				-0.0
911,958	-				-0.2
911,958	-				+0.5
912,096	+		Psyr_0806	0.19	-0.0
912,096	+		Psyr_0806	0.19	-0.8
912,096	+		Psyr_0806	0.19	+0.8
912,096	+		Psyr_0806	0.19	+0.0
912,301	+		Psyr_0806	0.40	+0.2
912,301	+		Psyr_0806	0.40	-0.9
912,301	+		Psyr_0806	0.40	+1.1
912,302	-		Psyr_0806	0.40	+0.1
912,302	-		Psyr_0806	0.40	+0.6
912,302	-		Psyr_0806	0.40	-0.2
912,302	-		Psyr_0806	0.40	-0.9
912,302	-		Psyr_0806	0.40	+0.3
912,476	+		Psyr_0806	0.59	-1.0
912,476	+		Psyr_0806	0.59	-1.1
912,477	-		Psyr_0806	0.59	+0.3
912,477	-		Psyr_0806	0.59	+2.0
912,589	+		Psyr_0806	0.71	+0.8
912,589	+		Psyr_0806	0.71	+0.1
912,592	+		Psyr_0806	0.71	+0.5
912,592	+		Psyr_0806	0.71	-0.9
912,593	-		Psyr_0806	0.71	-0.5
912,593	-		Psyr_0806	0.71	-1.2
912,593	-		Psyr_0806	0.71	+0.0
912,728	+		Psyr_0806	0.85	+0.2
912,728	+		Psyr_0806	0.85	-0.4
912,728	+		Psyr_0806	0.85	-0.7
912,728	+		Psyr_0806	0.85	-0.9
912,729	-		Psyr_0806	0.85	-1.3
912,761	+		Psyr_0806	0.89	+0.9
912,763	+		Psyr_0806	0.89	-0.4
912,763	+		Psyr_0806	0.89	-0.0
912,763	+		Psyr_0806	0.89	-1.5
912,763	+		Psyr_0806	0.89	+2.5
912,763	+		Psyr_0806	0.89	+0.8
912,763	+		Psyr_0806	0.89	+0.5
912,763	+		Psyr_0806	0.89	-0.6
912,763	+		Psyr_0806	0.89	-0.4
912,763	+		Psyr_0806	0.89	-0.3
912,764	-		Psyr_0806	0.89	-1.0
912,764	-		Psyr_0806	0.89	+1.2
912,764	-		Psyr_0806	0.89	+1.0
912,862	+				+0.8
912,862	+				+0.6
912,866	+				-0.1
912,866	+				-0.2
912,866	+				+0.9
912,866	+				+0.5
912,866	+				+0.9
912,867	-				-1.1
912,867	-				+0.5
912,867	-				-1.6
912,867	-				-1.4
912,867	-				-0.1
912,873	+				+0.2
912,873	+				-0.1
912,873	+				+1.8
912,873	+				-0.2
912,873	+				-0.1
912,873	+				-0.7
912,874	-				+0.1
912,874	-				-1.1
913,079	+		Psyr_0807	0.28	-1.5
913,323	+		Psyr_0807	0.61	-0.9
913,324	-		Psyr_0807	0.61	-0.3
913,324	-		Psyr_0807	0.61	-1.3
913,553	+				+0.7
913,556	-				-2.2
913,556	-				-2.1
913,578	+				-0.1
913,622	-				-1.3
913,715	+				+0.8