Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_15140 and AO356_15145 overlap by 4 nucleotides
AO356_15140: AO356_15140 - homoserine dehydrogenase, at 3,429,504 to 3,430,562
_15140
AO356_15145: AO356_15145 - aldehyde dehydrogenase, at 3,430,559 to 3,431,971
_15145
Position (kb)
3429
3430
3431 Strain fitness (log2 ratio)
-1
0
1 at 3428.600 kb on - strand at 3428.600 kb on - strand at 3429.379 kb on + strand at 3429.433 kb on - strand at 3429.433 kb on - strand at 3429.462 kb on + strand at 3429.462 kb on + strand at 3429.462 kb on + strand at 3429.463 kb on - strand at 3429.463 kb on - strand at 3429.496 kb on + strand at 3429.497 kb on - strand at 3429.497 kb on - strand at 3429.513 kb on + strand at 3429.513 kb on + strand at 3429.513 kb on + strand at 3429.514 kb on - strand at 3429.514 kb on - strand at 3429.954 kb on + strand, within AO356_15140 at 3429.954 kb on + strand, within AO356_15140 at 3430.380 kb on - strand, within AO356_15140 at 3430.716 kb on + strand, within AO356_15145 at 3430.925 kb on + strand, within AO356_15145 at 3430.925 kb on + strand, within AO356_15145 at 3430.925 kb on + strand, within AO356_15145 at 3430.926 kb on - strand, within AO356_15145 at 3430.926 kb on - strand, within AO356_15145 at 3430.997 kb on + strand, within AO356_15145 at 3430.997 kb on + strand, within AO356_15145 at 3430.998 kb on - strand, within AO356_15145 at 3431.114 kb on + strand, within AO356_15145 at 3431.115 kb on - strand, within AO356_15145 at 3431.115 kb on - strand, within AO356_15145 at 3431.115 kb on - strand, within AO356_15145 at 3431.118 kb on + strand, within AO356_15145 at 3431.119 kb on - strand, within AO356_15145 at 3431.146 kb on - strand, within AO356_15145 at 3431.146 kb on - strand, within AO356_15145 at 3431.426 kb on + strand, within AO356_15145 at 3431.427 kb on - strand, within AO356_15145 at 3431.427 kb on - strand, within AO356_15145
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 3,428,600 - -0.8 3,428,600 - +0.6 3,429,379 + -0.7 3,429,433 - +0.1 3,429,433 - +0.5 3,429,462 + +0.0 3,429,462 + +0.5 3,429,462 + +0.5 3,429,463 - -0.1 3,429,463 - +0.2 3,429,496 + +1.3 3,429,497 - -0.6 3,429,497 - +0.9 3,429,513 + +0.2 3,429,513 + +0.3 3,429,513 + -0.3 3,429,514 - -0.2 3,429,514 - -0.4 3,429,954 + AO356_15140 0.42 +0.7 3,429,954 + AO356_15140 0.42 +1.0 3,430,380 - AO356_15140 0.83 -0.3 3,430,716 + AO356_15145 0.11 -0.5 3,430,925 + AO356_15145 0.26 +0.9 3,430,925 + AO356_15145 0.26 +0.7 3,430,925 + AO356_15145 0.26 +0.7 3,430,926 - AO356_15145 0.26 -0.9 3,430,926 - AO356_15145 0.26 +1.5 3,430,997 + AO356_15145 0.31 -0.2 3,430,997 + AO356_15145 0.31 -0.3 3,430,998 - AO356_15145 0.31 +0.2 3,431,114 + AO356_15145 0.39 +0.2 3,431,115 - AO356_15145 0.39 -0.1 3,431,115 - AO356_15145 0.39 +0.0 3,431,115 - AO356_15145 0.39 -1.2 3,431,118 + AO356_15145 0.40 -0.9 3,431,119 - AO356_15145 0.40 -0.7 3,431,146 - AO356_15145 0.42 +0.5 3,431,146 - AO356_15145 0.42 +0.2 3,431,426 + AO356_15145 0.61 +0.7 3,431,427 - AO356_15145 0.61 +0.6 3,431,427 - AO356_15145 0.61 +0.2
Or see this region's nucleotide sequence