Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_15140

Experiment: LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_15140 and AO356_15145 overlap by 4 nucleotides AO356_15140: AO356_15140 - homoserine dehydrogenase, at 3,429,504 to 3,430,562 _15140 AO356_15145: AO356_15145 - aldehyde dehydrogenase, at 3,430,559 to 3,431,971 _15145 Position (kb) 3429 3430 3431Strain fitness (log2 ratio) -1 0 1at 3428.600 kb on - strandat 3428.600 kb on - strandat 3429.379 kb on + strandat 3429.433 kb on - strandat 3429.433 kb on - strandat 3429.462 kb on + strandat 3429.462 kb on + strandat 3429.462 kb on + strandat 3429.463 kb on - strandat 3429.463 kb on - strandat 3429.496 kb on + strandat 3429.497 kb on - strandat 3429.497 kb on - strandat 3429.513 kb on + strandat 3429.513 kb on + strandat 3429.513 kb on + strandat 3429.514 kb on - strandat 3429.514 kb on - strandat 3429.954 kb on + strand, within AO356_15140at 3429.954 kb on + strand, within AO356_15140at 3430.380 kb on - strand, within AO356_15140at 3430.716 kb on + strand, within AO356_15145at 3430.925 kb on + strand, within AO356_15145at 3430.925 kb on + strand, within AO356_15145at 3430.925 kb on + strand, within AO356_15145at 3430.926 kb on - strand, within AO356_15145at 3430.926 kb on - strand, within AO356_15145at 3430.997 kb on + strand, within AO356_15145at 3430.997 kb on + strand, within AO356_15145at 3430.998 kb on - strand, within AO356_15145at 3431.114 kb on + strand, within AO356_15145at 3431.115 kb on - strand, within AO356_15145at 3431.115 kb on - strand, within AO356_15145at 3431.115 kb on - strand, within AO356_15145at 3431.118 kb on + strand, within AO356_15145at 3431.119 kb on - strand, within AO356_15145at 3431.146 kb on - strand, within AO356_15145at 3431.146 kb on - strand, within AO356_15145at 3431.426 kb on + strand, within AO356_15145at 3431.427 kb on - strand, within AO356_15145at 3431.427 kb on - strand, within AO356_15145

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Per-strain Table

Position Strand Gene LocusTag Fraction LB
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3,428,600 - -0.8
3,428,600 - +0.6
3,429,379 + -0.7
3,429,433 - +0.1
3,429,433 - +0.5
3,429,462 + +0.0
3,429,462 + +0.5
3,429,462 + +0.5
3,429,463 - -0.1
3,429,463 - +0.2
3,429,496 + +1.3
3,429,497 - -0.6
3,429,497 - +0.9
3,429,513 + +0.2
3,429,513 + +0.3
3,429,513 + -0.3
3,429,514 - -0.2
3,429,514 - -0.4
3,429,954 + AO356_15140 0.42 +0.7
3,429,954 + AO356_15140 0.42 +1.0
3,430,380 - AO356_15140 0.83 -0.3
3,430,716 + AO356_15145 0.11 -0.5
3,430,925 + AO356_15145 0.26 +0.9
3,430,925 + AO356_15145 0.26 +0.7
3,430,925 + AO356_15145 0.26 +0.7
3,430,926 - AO356_15145 0.26 -0.9
3,430,926 - AO356_15145 0.26 +1.5
3,430,997 + AO356_15145 0.31 -0.2
3,430,997 + AO356_15145 0.31 -0.3
3,430,998 - AO356_15145 0.31 +0.2
3,431,114 + AO356_15145 0.39 +0.2
3,431,115 - AO356_15145 0.39 -0.1
3,431,115 - AO356_15145 0.39 +0.0
3,431,115 - AO356_15145 0.39 -1.2
3,431,118 + AO356_15145 0.40 -0.9
3,431,119 - AO356_15145 0.40 -0.7
3,431,146 - AO356_15145 0.42 +0.5
3,431,146 - AO356_15145 0.42 +0.2
3,431,426 + AO356_15145 0.61 +0.7
3,431,427 - AO356_15145 0.61 +0.6
3,431,427 - AO356_15145 0.61 +0.2

Or see this region's nucleotide sequence