Experiment: KB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4655 and Psyr_4656 are separated by 282 nucleotides Psyr_4656 and Psyr_4657 are separated by 217 nucleotides Psyr_4657 and Psyr_4658 overlap by 4 nucleotides
Psyr_4655: Psyr_4655 - hypothetical protein, at 5,516,978 to 5,517,334
_4655
Psyr_4656: Psyr_4656 - hypothetical protein, at 5,517,617 to 5,517,946
_4656
Psyr_4657: Psyr_4657 - CDS, at 5,518,164 to 5,518,826
_4657
Psyr_4658: Psyr_4658 - CDS, at 5,518,823 to 5,519,035
_4658
Position (kb) 5517
5518 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 5516.652 kb on + strand at 5516.652 kb on + strand at 5516.652 kb on + strand at 5516.652 kb on + strand at 5516.652 kb on + strand at 5516.652 kb on + strand at 5516.652 kb on + strand at 5516.653 kb on - strand at 5516.653 kb on - strand at 5516.653 kb on - strand at 5516.653 kb on - strand at 5516.653 kb on - strand at 5516.653 kb on - strand at 5516.661 kb on + strand at 5516.661 kb on + strand at 5516.661 kb on + strand at 5516.661 kb on + strand at 5516.661 kb on + strand at 5516.661 kb on + strand at 5516.662 kb on - strand at 5516.662 kb on - strand at 5516.662 kb on - strand at 5516.662 kb on - strand at 5516.662 kb on - strand at 5516.662 kb on - strand at 5516.662 kb on - strand at 5516.669 kb on + strand at 5516.670 kb on - strand at 5516.700 kb on - strand at 5516.730 kb on + strand at 5516.730 kb on + strand at 5516.730 kb on + strand at 5516.730 kb on + strand at 5516.730 kb on + strand at 5516.730 kb on + strand at 5516.730 kb on + strand at 5516.730 kb on + strand at 5516.730 kb on + strand at 5516.730 kb on + strand at 5516.730 kb on + strand at 5516.730 kb on + strand at 5516.730 kb on + strand at 5516.730 kb on + strand at 5516.730 kb on + strand at 5516.730 kb on + strand at 5516.730 kb on + strand at 5516.731 kb on - strand at 5516.731 kb on - strand at 5516.731 kb on - strand at 5516.731 kb on - strand at 5516.731 kb on - strand at 5516.731 kb on - strand at 5516.731 kb on - strand at 5516.731 kb on - strand at 5516.731 kb on - strand at 5516.731 kb on - strand at 5516.731 kb on - strand at 5516.731 kb on - strand at 5516.731 kb on - strand at 5516.731 kb on - strand at 5516.731 kb on - strand at 5516.731 kb on - strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.734 kb on + strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.735 kb on - strand at 5516.882 kb on + strand at 5516.882 kb on + strand at 5516.882 kb on + strand at 5516.882 kb on + strand at 5516.882 kb on + strand at 5516.882 kb on + strand at 5516.882 kb on + strand at 5516.882 kb on + strand at 5516.883 kb on - strand at 5516.883 kb on - strand at 5516.883 kb on - strand at 5516.883 kb on - strand at 5516.901 kb on + strand at 5516.902 kb on - strand at 5516.905 kb on + strand at 5516.912 kb on + strand at 5516.945 kb on + strand at 5516.954 kb on + strand at 5517.080 kb on - strand, within Psyr_4655 at 5517.080 kb on - strand, within Psyr_4655 at 5517.128 kb on + strand, within Psyr_4655 at 5517.128 kb on + strand, within Psyr_4655 at 5517.128 kb on + strand, within Psyr_4655 at 5517.129 kb on - strand at 5517.129 kb on - strand, within Psyr_4655 at 5517.129 kb on - strand, within Psyr_4655 at 5517.130 kb on + strand, within Psyr_4655 at 5517.131 kb on - strand, within Psyr_4655 at 5517.255 kb on + strand, within Psyr_4655 at 5517.256 kb on - strand, within Psyr_4655 at 5517.256 kb on - strand, within Psyr_4655 at 5517.256 kb on - strand, within Psyr_4655 at 5517.351 kb on + strand at 5517.351 kb on + strand at 5517.351 kb on + strand at 5517.351 kb on + strand at 5517.352 kb on - strand at 5517.352 kb on - strand at 5517.352 kb on - strand at 5517.355 kb on + strand at 5517.355 kb on + strand at 5517.355 kb on + strand at 5517.355 kb on + strand at 5517.355 kb on + strand at 5517.355 kb on + strand at 5517.355 kb on + strand at 5517.355 kb on + strand at 5517.356 kb on - strand at 5517.356 kb on - strand at 5517.356 kb on - strand at 5517.356 kb on - strand at 5517.356 kb on - strand at 5517.356 kb on - strand at 5517.356 kb on - strand at 5517.356 kb on - strand at 5517.356 kb on - strand at 5517.356 kb on - strand at 5517.356 kb on - strand at 5517.356 kb on - strand at 5517.395 kb on + strand at 5517.395 kb on + strand at 5517.395 kb on + strand at 5517.395 kb on + strand at 5517.396 kb on - strand at 5517.396 kb on - strand at 5517.396 kb on - strand at 5517.396 kb on - strand at 5517.396 kb on - strand at 5517.396 kb on - strand at 5517.396 kb on - strand at 5517.396 kb on - strand at 5517.396 kb on - strand at 5517.396 kb on - strand at 5517.396 kb on - strand at 5517.396 kb on - strand at 5517.396 kb on - strand at 5517.411 kb on + strand at 5517.412 kb on - strand at 5517.440 kb on + strand at 5517.440 kb on + strand at 5517.441 kb on - strand at 5517.441 kb on - strand at 5517.441 kb on - strand at 5517.441 kb on - strand at 5517.522 kb on + strand at 5517.532 kb on + strand at 5517.619 kb on - strand at 5517.619 kb on - strand at 5517.619 kb on - strand at 5517.626 kb on + strand at 5517.626 kb on + strand at 5517.626 kb on + strand at 5517.627 kb on - strand at 5517.627 kb on - strand at 5517.627 kb on - strand at 5517.627 kb on - strand at 5517.751 kb on + strand, within Psyr_4656 at 5517.751 kb on + strand, within Psyr_4656 at 5517.751 kb on + strand, within Psyr_4656 at 5517.752 kb on - strand, within Psyr_4656 at 5517.752 kb on - strand, within Psyr_4656 at 5517.773 kb on - strand, within Psyr_4656 at 5517.785 kb on + strand, within Psyr_4656 at 5517.786 kb on - strand, within Psyr_4656 at 5517.786 kb on - strand, within Psyr_4656 at 5517.786 kb on - strand, within Psyr_4656 at 5517.813 kb on + strand, within Psyr_4656 at 5517.830 kb on + strand, within Psyr_4656 at 5517.889 kb on + strand, within Psyr_4656 at 5517.889 kb on + strand, within Psyr_4656 at 5517.890 kb on - strand, within Psyr_4656 at 5517.916 kb on + strand at 5517.916 kb on + strand at 5517.917 kb on - strand at 5517.917 kb on - strand at 5517.978 kb on + strand at 5517.979 kb on - strand at 5517.979 kb on - strand at 5517.979 kb on - strand at 5517.979 kb on - strand at 5518.021 kb on + strand at 5518.021 kb on + strand at 5518.021 kb on + strand at 5518.021 kb on + strand at 5518.022 kb on - strand at 5518.022 kb on - strand at 5518.059 kb on - strand at 5518.126 kb on + strand at 5518.126 kb on + strand at 5518.126 kb on + strand at 5518.126 kb on + strand at 5518.126 kb on + strand at 5518.126 kb on + strand at 5518.127 kb on - strand at 5518.127 kb on - strand at 5518.127 kb on - strand at 5518.173 kb on + strand at 5518.173 kb on + strand at 5518.174 kb on - strand at 5518.174 kb on - strand at 5518.174 kb on - strand at 5518.189 kb on + strand at 5518.190 kb on - strand at 5518.200 kb on + strand at 5518.201 kb on - strand at 5518.204 kb on + strand at 5518.205 kb on - strand at 5518.205 kb on - strand at 5518.205 kb on - strand at 5518.205 kb on - strand at 5518.205 kb on - strand at 5518.205 kb on - strand at 5518.363 kb on - strand, within Psyr_4657 at 5518.407 kb on + strand, within Psyr_4657 at 5518.407 kb on + strand, within Psyr_4657 at 5518.407 kb on + strand, within Psyr_4657 at 5518.407 kb on + strand, within Psyr_4657 at 5518.407 kb on + strand, within Psyr_4657 at 5518.681 kb on - strand, within Psyr_4657 at 5518.681 kb on - strand, within Psyr_4657 at 5518.681 kb on - strand, within Psyr_4657 at 5518.681 kb on - strand, within Psyr_4657 at 5518.681 kb on - strand, within Psyr_4657 at 5518.681 kb on - strand, within Psyr_4657 at 5518.681 kb on - strand, within Psyr_4657 at 5518.681 kb on - strand, within Psyr_4657 at 5518.681 kb on - strand, within Psyr_4657 at 5518.681 kb on - strand, within Psyr_4657 at 5518.681 kb on - strand, within Psyr_4657 at 5518.681 kb on - strand, within Psyr_4657 at 5518.681 kb on - strand, within Psyr_4657 at 5518.741 kb on + strand, within Psyr_4657 at 5518.741 kb on + strand, within Psyr_4657 at 5518.741 kb on + strand, within Psyr_4657 at 5518.771 kb on + strand at 5518.779 kb on + strand at 5518.793 kb on - strand at 5518.869 kb on + strand, within Psyr_4658 at 5518.870 kb on - strand, within Psyr_4658
Per-strain Table
Position Strand Gene LocusTag Fraction KB remove 5,516,652 + +0.4 5,516,652 + +2.0 5,516,652 + +0.4 5,516,652 + +0.5 5,516,652 + -0.8 5,516,652 + +0.2 5,516,652 + +2.1 5,516,653 - -0.5 5,516,653 - -0.3 5,516,653 - +0.8 5,516,653 - -0.2 5,516,653 - +0.6 5,516,653 - +0.8 5,516,661 + +0.5 5,516,661 + +0.5 5,516,661 + +1.0 5,516,661 + +1.6 5,516,661 + -0.2 5,516,661 + -1.8 5,516,662 - -2.2 5,516,662 - +0.3 5,516,662 - -0.6 5,516,662 - +0.2 5,516,662 - +0.4 5,516,662 - +1.3 5,516,662 - -0.3 5,516,669 + -2.5 5,516,670 - +0.8 5,516,700 - -0.2 5,516,730 + -0.2 5,516,730 + +0.3 5,516,730 + -0.3 5,516,730 + +0.1 5,516,730 + +0.4 5,516,730 + -0.2 5,516,730 + +2.6 5,516,730 + -0.4 5,516,730 + +0.2 5,516,730 + -0.2 5,516,730 + +0.8 5,516,730 + -1.5 5,516,730 + -0.3 5,516,730 + +0.8 5,516,730 + -0.1 5,516,730 + -1.5 5,516,730 + -0.3 5,516,731 - -0.2 5,516,731 - -0.7 5,516,731 - +0.2 5,516,731 - +2.8 5,516,731 - +0.9 5,516,731 - -1.7 5,516,731 - +1.4 5,516,731 - -0.4 5,516,731 - -0.5 5,516,731 - +0.2 5,516,731 - -0.5 5,516,731 - +0.5 5,516,731 - -3.3 5,516,731 - -0.4 5,516,731 - +0.4 5,516,731 - +0.5 5,516,734 + -1.1 5,516,734 + +1.6 5,516,734 + -0.2 5,516,734 + +0.7 5,516,734 + -1.4 5,516,734 + +1.9 5,516,734 + +0.2 5,516,734 + -0.4 5,516,734 + -1.7 5,516,734 + -0.4 5,516,734 + +0.6 5,516,734 + -0.5 5,516,734 + -1.2 5,516,734 + +0.5 5,516,734 + -0.2 5,516,734 + +2.4 5,516,734 + +1.4 5,516,734 + -1.1 5,516,734 + -0.3 5,516,734 + -0.7 5,516,734 + +0.6 5,516,734 + -1.4 5,516,734 + -0.0 5,516,734 + -0.8 5,516,734 + +0.3 5,516,734 + -0.6 5,516,734 + -0.0 5,516,734 + -0.8 5,516,734 + -0.5 5,516,734 + +2.4 5,516,734 + +1.0 5,516,734 + +2.0 5,516,734 + -0.8 5,516,734 + +0.8 5,516,734 + -0.1 5,516,734 + -0.5 5,516,734 + -0.4 5,516,734 + +0.3 5,516,734 + +1.1 5,516,734 + -0.2 5,516,734 + +0.7 5,516,734 + +0.8 5,516,735 - +0.2 5,516,735 - +1.8 5,516,735 - -0.1 5,516,735 - -1.9 5,516,735 - +1.3 5,516,735 - -0.5 5,516,735 - -0.0 5,516,735 - -1.7 5,516,735 - +0.0 5,516,735 - -3.5 5,516,735 - +0.2 5,516,735 - -0.3 5,516,735 - +0.8 5,516,735 - -0.2 5,516,735 - +0.8 5,516,735 - +0.5 5,516,735 - +1.9 5,516,735 - +0.2 5,516,735 - -1.5 5,516,735 - -1.1 5,516,735 - +0.2 5,516,735 - +0.9 5,516,735 - +0.1 5,516,735 - +0.5 5,516,735 - -0.1 5,516,735 - +1.8 5,516,735 - +0.1 5,516,735 - +0.1 5,516,735 - +0.9 5,516,735 - -0.8 5,516,735 - -0.3 5,516,735 - -0.5 5,516,735 - -0.4 5,516,735 - -0.4 5,516,735 - -0.4 5,516,735 - +1.1 5,516,735 - -0.5 5,516,735 - -2.7 5,516,735 - +0.8 5,516,735 - +0.1 5,516,735 - -0.2 5,516,735 - +0.8 5,516,735 - +0.5 5,516,882 + +0.2 5,516,882 + +0.1 5,516,882 + +0.2 5,516,882 + +1.3 5,516,882 + -0.9 5,516,882 + +1.1 5,516,882 + +0.8 5,516,882 + +0.3 5,516,883 - +0.1 5,516,883 - +2.0 5,516,883 - +1.2 5,516,883 - +1.1 5,516,901 + -1.0 5,516,902 - -1.4 5,516,905 + -0.7 5,516,912 + +0.1 5,516,945 + -0.4 5,516,954 + -0.6 5,517,080 - Psyr_4655 0.29 -2.5 5,517,080 - Psyr_4655 0.29 +0.3 5,517,128 + Psyr_4655 0.42 -0.6 5,517,128 + Psyr_4655 0.42 +0.7 5,517,128 + Psyr_4655 0.42 -0.4 5,517,129 - -0.2 5,517,129 - Psyr_4655 0.42 -1.2 5,517,129 - Psyr_4655 0.42 -0.6 5,517,130 + Psyr_4655 0.43 +1.2 5,517,131 - Psyr_4655 0.43 +0.6 5,517,255 + Psyr_4655 0.78 +1.7 5,517,256 - Psyr_4655 0.78 +0.1 5,517,256 - Psyr_4655 0.78 +1.2 5,517,256 - Psyr_4655 0.78 -0.3 5,517,351 + +1.3 5,517,351 + +0.2 5,517,351 + +1.1 5,517,351 + -0.4 5,517,352 - -0.4 5,517,352 - +0.1 5,517,352 - +0.4 5,517,355 + -0.0 5,517,355 + -0.6 5,517,355 + -0.2 5,517,355 + -0.4 5,517,355 + -0.3 5,517,355 + +0.2 5,517,355 + -2.3 5,517,355 + -3.1 5,517,356 - +2.8 5,517,356 - +2.0 5,517,356 - -1.0 5,517,356 - +0.2 5,517,356 - +1.8 5,517,356 - +0.0 5,517,356 - +0.6 5,517,356 - +0.5 5,517,356 - +0.2 5,517,356 - -0.3 5,517,356 - +0.8 5,517,356 - +0.1 5,517,395 + +0.4 5,517,395 + -0.8 5,517,395 + +0.6 5,517,395 + -0.1 5,517,396 - -0.7 5,517,396 - -0.3 5,517,396 - +1.0 5,517,396 - -1.8 5,517,396 - +1.3 5,517,396 - -0.3 5,517,396 - -0.3 5,517,396 - +0.6 5,517,396 - +0.7 5,517,396 - +1.3 5,517,396 - -1.1 5,517,396 - -0.4 5,517,396 - +1.5 5,517,411 + -0.3 5,517,412 - -0.0 5,517,440 + +1.2 5,517,440 + +1.0 5,517,441 - +0.7 5,517,441 - +1.6 5,517,441 - -0.7 5,517,441 - +0.4 5,517,522 + +0.8 5,517,532 + +0.7 5,517,619 - +1.3 5,517,619 - -1.2 5,517,619 - -0.4 5,517,626 + +0.4 5,517,626 + -1.5 5,517,626 + -0.2 5,517,627 - +1.1 5,517,627 - +0.6 5,517,627 - +0.8 5,517,627 - +0.4 5,517,751 + Psyr_4656 0.41 +1.6 5,517,751 + Psyr_4656 0.41 +3.8 5,517,751 + Psyr_4656 0.41 +1.0 5,517,752 - Psyr_4656 0.41 +0.4 5,517,752 - Psyr_4656 0.41 +0.0 5,517,773 - Psyr_4656 0.47 -0.8 5,517,785 + Psyr_4656 0.51 -0.4 5,517,786 - Psyr_4656 0.51 -0.4 5,517,786 - Psyr_4656 0.51 +1.9 5,517,786 - Psyr_4656 0.51 -0.2 5,517,813 + Psyr_4656 0.59 -0.3 5,517,830 + Psyr_4656 0.65 +2.3 5,517,889 + Psyr_4656 0.82 +2.0 5,517,889 + Psyr_4656 0.82 +0.0 5,517,890 - Psyr_4656 0.83 +1.7 5,517,916 + -0.6 5,517,916 + -0.0 5,517,917 - +0.4 5,517,917 - -0.2 5,517,978 + -2.7 5,517,979 - -0.6 5,517,979 - +0.4 5,517,979 - +0.8 5,517,979 - -0.4 5,518,021 + +0.2 5,518,021 + +2.0 5,518,021 + +1.3 5,518,021 + -1.2 5,518,022 - +0.6 5,518,022 - +0.8 5,518,059 - +0.4 5,518,126 + +1.0 5,518,126 + +0.4 5,518,126 + -0.8 5,518,126 + +1.3 5,518,126 + +0.5 5,518,126 + -0.2 5,518,127 - +1.0 5,518,127 - -0.0 5,518,127 - -0.0 5,518,173 + -0.4 5,518,173 + +1.9 5,518,174 - +0.1 5,518,174 - +0.1 5,518,174 - -0.8 5,518,189 + +0.4 5,518,190 - +0.1 5,518,200 + +1.5 5,518,201 - +1.4 5,518,204 + +1.5 5,518,205 - -0.4 5,518,205 - +0.2 5,518,205 - -0.5 5,518,205 - +0.3 5,518,205 - -0.2 5,518,205 - +0.4 5,518,363 - Psyr_4657 0.30 -1.1 5,518,407 + Psyr_4657 0.37 +0.2 5,518,407 + Psyr_4657 0.37 +0.2 5,518,407 + Psyr_4657 0.37 -0.2 5,518,407 + Psyr_4657 0.37 -1.2 5,518,407 + Psyr_4657 0.37 -1.0 5,518,681 - Psyr_4657 0.78 -0.6 5,518,681 - Psyr_4657 0.78 -0.3 5,518,681 - Psyr_4657 0.78 -1.0 5,518,681 - Psyr_4657 0.78 -0.0 5,518,681 - Psyr_4657 0.78 +0.2 5,518,681 - Psyr_4657 0.78 -0.8 5,518,681 - Psyr_4657 0.78 -0.7 5,518,681 - Psyr_4657 0.78 +0.7 5,518,681 - Psyr_4657 0.78 -2.2 5,518,681 - Psyr_4657 0.78 +0.7 5,518,681 - Psyr_4657 0.78 -0.0 5,518,681 - Psyr_4657 0.78 +0.3 5,518,681 - Psyr_4657 0.78 +0.4 5,518,741 + Psyr_4657 0.87 -0.1 5,518,741 + Psyr_4657 0.87 +0.4 5,518,741 + Psyr_4657 0.87 +0.1 5,518,771 + -0.1 5,518,779 + +0.0 5,518,793 - +2.6 5,518,869 + Psyr_4658 0.22 -1.1 5,518,870 - Psyr_4658 0.22 +0.4
Or see this region's nucleotide sequence