Experiment: MoLS4 without vitamins with Casaminos 0.2%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVUA0086 and DORF702 overlap by 4 nucleotides DORF702 and DVUA0087 overlap by 4 nucleotides
DVUA0086: DVUA0086 - response regulator (TIGR), at 114,998 to 116,089
DVUA0086
DORF702: DORF702 - no description, at 116,086 to 116,478
DORF702
DVUA0087: DVUA0087 - sensory box histidine kinase (TIGR), at 116,475 to 119,588
DVUA0087
Position (kb)
116
117 Strain fitness (log2 ratio)
-2
-1
0
1 at 115.114 kb on + strand, within DVUA0086 at 115.136 kb on + strand, within DVUA0086 at 115.227 kb on + strand, within DVUA0086 at 115.227 kb on - strand, within DVUA0086 at 115.437 kb on + strand, within DVUA0086 at 115.438 kb on + strand, within DVUA0086 at 115.445 kb on - strand, within DVUA0086 at 115.450 kb on + strand, within DVUA0086 at 115.472 kb on - strand, within DVUA0086 at 115.524 kb on - strand, within DVUA0086 at 115.662 kb on + strand, within DVUA0086 at 115.736 kb on - strand, within DVUA0086 at 115.747 kb on + strand, within DVUA0086 at 115.750 kb on - strand, within DVUA0086 at 115.910 kb on + strand, within DVUA0086 at 115.911 kb on + strand, within DVUA0086 at 115.919 kb on - strand, within DVUA0086 at 115.919 kb on - strand, within DVUA0086 at 115.984 kb on + strand at 116.207 kb on - strand, within DORF702 at 116.326 kb on - strand, within DORF702 at 116.486 kb on + strand at 116.499 kb on - strand at 116.543 kb on + strand at 116.543 kb on + strand at 116.603 kb on + strand at 116.614 kb on + strand at 116.750 kb on - strand at 116.811 kb on + strand, within DVUA0087 at 116.818 kb on + strand, within DVUA0087 at 117.026 kb on + strand, within DVUA0087 at 117.069 kb on + strand, within DVUA0087 at 117.136 kb on + strand, within DVUA0087 at 117.181 kb on - strand, within DVUA0087 at 117.346 kb on + strand, within DVUA0087 at 117.351 kb on + strand, within DVUA0087 at 117.376 kb on - strand, within DVUA0087 at 117.378 kb on + strand, within DVUA0087 at 117.378 kb on + strand, within DVUA0087 at 117.378 kb on + strand, within DVUA0087 at 117.381 kb on - strand, within DVUA0087 at 117.386 kb on - strand, within DVUA0087 at 117.386 kb on - strand, within DVUA0087
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 without vitamins with Casaminos 0.2% remove 115,114 + DVUA0086 0.11 -1.0 115,136 + DVUA0086 0.13 -0.1 115,227 + DVUA0086 0.21 -0.2 115,227 - DVUA0086 0.21 +0.1 115,437 + DVUA0086 0.40 -0.2 115,438 + DVUA0086 0.40 -0.9 115,445 - DVUA0086 0.41 -0.8 115,450 + DVUA0086 0.41 +0.5 115,472 - DVUA0086 0.43 -1.4 115,524 - DVUA0086 0.48 -0.1 115,662 + DVUA0086 0.61 +0.2 115,736 - DVUA0086 0.68 -1.3 115,747 + DVUA0086 0.69 -1.0 115,750 - DVUA0086 0.69 -0.0 115,910 + DVUA0086 0.84 -0.4 115,911 + DVUA0086 0.84 -1.2 115,919 - DVUA0086 0.84 -0.3 115,919 - DVUA0086 0.84 +0.1 115,984 + -0.4 116,207 - DORF702 0.31 +1.1 116,326 - DORF702 0.61 +0.2 116,486 + -0.8 116,499 - -0.6 116,543 + +1.1 116,543 + -0.2 116,603 + -0.2 116,614 + -0.0 116,750 - -0.4 116,811 + DVUA0087 0.11 -1.2 116,818 + DVUA0087 0.11 -2.2 117,026 + DVUA0087 0.18 -0.3 117,069 + DVUA0087 0.19 -2.2 117,136 + DVUA0087 0.21 -1.2 117,181 - DVUA0087 0.23 -1.1 117,346 + DVUA0087 0.28 +0.0 117,351 + DVUA0087 0.28 -2.3 117,376 - DVUA0087 0.29 +0.2 117,378 + DVUA0087 0.29 -0.2 117,378 + DVUA0087 0.29 +0.2 117,378 + DVUA0087 0.29 -0.2 117,381 - DVUA0087 0.29 +0.0 117,386 - DVUA0087 0.29 -0.6 117,386 - DVUA0087 0.29 +0.6
Or see this region's nucleotide sequence