Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS06315

Experiment: Formate N-free with 2mM Adenosine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMMJJ_RS06305 and MMJJ_RS06310 are separated by 4 nucleotidesMMJJ_RS06310 and MMJJ_RS06315 are separated by 16 nucleotidesMMJJ_RS06315 and MMJJ_RS06320 are separated by 21 nucleotidesMMJJ_RS06320 and MMJJ_RS06325 are separated by 10 nucleotides MMJJ_RS06305: MMJJ_RS06305 - tetrahydromethanopterin S-methyltransferase subunit G, at 1,169,109 to 1,169,333 _RS06305 MMJJ_RS06310: MMJJ_RS06310 - tetrahydromethanopterin S-methyltransferase subunit A, at 1,169,338 to 1,170,099 _RS06310 MMJJ_RS06315: MMJJ_RS06315 - tetrahydromethanopterin S-methyltransferase subunit A, at 1,170,116 to 1,170,835 _RS06315 MMJJ_RS06320: MMJJ_RS06320 - tetrahydromethanopterin S-methyltransferase subunit B, at 1,170,857 to 1,171,183 _RS06320 MMJJ_RS06325: MMJJ_RS06325 - tetrahydromethanopterin S-methyltransferase subunit C, at 1,171,194 to 1,171,982 _RS06325 Position (kb) 1170 1171Strain fitness (log2 ratio) -1 0 1at 1170.858 kb on - strandat 1171.166 kb on - strandat 1171.779 kb on + strand, within MMJJ_RS06325

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Per-strain Table

Position Strand Gene LocusTag Fraction Formate N-free with 2mM Adenosine
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1,170,858 - -0.3
1,171,166 - -0.8
1,171,779 + MMJJ_RS06325 0.74 -0.6

Or see this region's nucleotide sequence