Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1191 and Dshi_1192 are separated by 5 nucleotides Dshi_1192 and Dshi_1193 are separated by 246 nucleotides
Dshi_1191: Dshi_1191 - Leucyl aminopeptidase (RefSeq), at 1,228,563 to 1,230,029
_1191
Dshi_1192: Dshi_1192 - DNA polymerase III chi subunit HolC (RefSeq), at 1,230,035 to 1,230,490
_1192
Dshi_1193: Dshi_1193 - cytochrome P450 (RefSeq), at 1,230,737 to 1,231,909
_1193
Position (kb)
1230
1231 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1229.189 kb on - strand, within Dshi_1191 at 1229.231 kb on - strand, within Dshi_1191 at 1229.235 kb on + strand, within Dshi_1191 at 1229.235 kb on + strand, within Dshi_1191 at 1229.235 kb on + strand, within Dshi_1191 at 1229.315 kb on + strand, within Dshi_1191 at 1229.383 kb on - strand, within Dshi_1191 at 1229.527 kb on + strand, within Dshi_1191 at 1229.600 kb on - strand, within Dshi_1191 at 1229.931 kb on + strand at 1229.931 kb on + strand at 1230.178 kb on + strand, within Dshi_1192 at 1230.269 kb on - strand, within Dshi_1192 at 1230.290 kb on + strand, within Dshi_1192 at 1230.561 kb on - strand at 1231.037 kb on + strand, within Dshi_1193 at 1231.037 kb on + strand, within Dshi_1193 at 1231.039 kb on + strand, within Dshi_1193 at 1231.073 kb on + strand, within Dshi_1193 at 1231.092 kb on - strand, within Dshi_1193 at 1231.112 kb on + strand, within Dshi_1193 at 1231.140 kb on - strand, within Dshi_1193 at 1231.163 kb on + strand, within Dshi_1193 at 1231.169 kb on + strand, within Dshi_1193 at 1231.418 kb on - strand, within Dshi_1193 at 1231.450 kb on - strand, within Dshi_1193
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml remove 1,229,189 - Dshi_1191 0.43 -0.6 1,229,231 - Dshi_1191 0.46 -1.7 1,229,235 + Dshi_1191 0.46 -1.1 1,229,235 + Dshi_1191 0.46 -3.5 1,229,235 + Dshi_1191 0.46 -1.3 1,229,315 + Dshi_1191 0.51 -1.2 1,229,383 - Dshi_1191 0.56 -0.8 1,229,527 + Dshi_1191 0.66 -1.7 1,229,600 - Dshi_1191 0.71 -1.2 1,229,931 + -1.0 1,229,931 + -1.3 1,230,178 + Dshi_1192 0.31 +1.3 1,230,269 - Dshi_1192 0.51 -2.5 1,230,290 + Dshi_1192 0.56 -0.6 1,230,561 - -0.6 1,231,037 + Dshi_1193 0.26 +0.8 1,231,037 + Dshi_1193 0.26 -1.3 1,231,039 + Dshi_1193 0.26 -0.5 1,231,073 + Dshi_1193 0.29 -0.5 1,231,092 - Dshi_1193 0.30 -1.0 1,231,112 + Dshi_1193 0.32 -0.1 1,231,140 - Dshi_1193 0.34 -0.4 1,231,163 + Dshi_1193 0.36 -3.3 1,231,169 + Dshi_1193 0.37 -1.6 1,231,418 - Dshi_1193 0.58 -1.7 1,231,450 - Dshi_1193 0.61 +0.1
Or see this region's nucleotide sequence