Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0648 and Dshi_0649 are separated by 16 nucleotides Dshi_0649 and Dshi_0650 are separated by 19 nucleotides Dshi_0650 and Dshi_0651 are separated by 330 nucleotides
Dshi_0648: Dshi_0648 - recombination protein RecR (RefSeq), at 650,663 to 651,262
_0648
Dshi_0649: Dshi_0649 - hypothetical protein (RefSeq), at 651,279 to 651,623
_0649
Dshi_0650: Dshi_0650 - DNA polymerase III, subunits gamma and tau (RefSeq), at 651,643 to 653,406
_0650
Dshi_0651: Dshi_0651 - NUDIX hydrolase (RefSeq), at 653,737 to 654,693
_0651
Position (kb) 651
652
653
654 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 650.645 kb on + strand at 650.755 kb on - strand, within Dshi_0648 at 651.022 kb on - strand, within Dshi_0648 at 651.116 kb on + strand, within Dshi_0648 at 651.128 kb on + strand, within Dshi_0648 at 651.262 kb on + strand at 651.290 kb on + strand at 651.308 kb on + strand at 651.366 kb on - strand, within Dshi_0649 at 651.366 kb on - strand, within Dshi_0649 at 651.444 kb on + strand, within Dshi_0649 at 651.481 kb on + strand, within Dshi_0649 at 651.486 kb on + strand, within Dshi_0649 at 651.489 kb on - strand, within Dshi_0649 at 651.499 kb on - strand, within Dshi_0649 at 651.499 kb on - strand, within Dshi_0649 at 651.518 kb on - strand, within Dshi_0649 at 651.565 kb on + strand, within Dshi_0649 at 651.624 kb on + strand at 653.510 kb on + strand at 653.653 kb on + strand at 653.661 kb on - strand at 653.700 kb on + strand at 653.726 kb on + strand at 653.733 kb on + strand at 653.741 kb on + strand at 653.741 kb on - strand at 653.966 kb on + strand, within Dshi_0651 at 653.984 kb on + strand, within Dshi_0651 at 654.047 kb on + strand, within Dshi_0651 at 654.114 kb on - strand, within Dshi_0651 at 654.125 kb on + strand, within Dshi_0651 at 654.159 kb on + strand, within Dshi_0651 at 654.166 kb on + strand, within Dshi_0651
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml remove 650,645 + +0.7 650,755 - Dshi_0648 0.15 -3.0 651,022 - Dshi_0648 0.60 -2.6 651,116 + Dshi_0648 0.76 -2.6 651,128 + Dshi_0648 0.78 -3.0 651,262 + -4.9 651,290 + +0.5 651,308 + -3.7 651,366 - Dshi_0649 0.25 -3.5 651,366 - Dshi_0649 0.25 -1.8 651,444 + Dshi_0649 0.48 -2.1 651,481 + Dshi_0649 0.59 -0.8 651,486 + Dshi_0649 0.60 -2.6 651,489 - Dshi_0649 0.61 -3.6 651,499 - Dshi_0649 0.64 -1.4 651,499 - Dshi_0649 0.64 -2.8 651,518 - Dshi_0649 0.69 -3.1 651,565 + Dshi_0649 0.83 -3.5 651,624 + -2.6 653,510 + -0.5 653,653 + +0.6 653,661 - -1.0 653,700 + -0.6 653,726 + -1.0 653,733 + +0.6 653,741 + +0.5 653,741 - +0.5 653,966 + Dshi_0651 0.24 +1.8 653,984 + Dshi_0651 0.26 -1.4 654,047 + Dshi_0651 0.32 -0.6 654,114 - Dshi_0651 0.39 -0.3 654,125 + Dshi_0651 0.41 -0.2 654,159 + Dshi_0651 0.44 -0.7 654,166 + Dshi_0651 0.45 -2.1
Or see this region's nucleotide sequence