Experiment: Chlorite 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_1025 and Ga0059261_1026 are separated by 149 nucleotides Ga0059261_1026 and Ga0059261_1027 overlap by 4 nucleotides
Ga0059261_1025: Ga0059261_1025 - outer membrane assembly lipoprotein YfiO, at 1,061,524 to 1,062,384
_1025
Ga0059261_1026: Ga0059261_1026 - DNA repair protein RecN, at 1,062,534 to 1,064,195
_1026
Ga0059261_1027: Ga0059261_1027 - Membrane proteins related to metalloendopeptidases, at 1,064,192 to 1,065,283
_1027
Position (kb)
1062
1063
1064
1065 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1062.238 kb on + strand, within Ga0059261_1025 at 1062.238 kb on + strand, within Ga0059261_1025 at 1062.238 kb on + strand, within Ga0059261_1025 at 1062.239 kb on - strand at 1062.256 kb on + strand at 1062.382 kb on + strand at 1062.382 kb on + strand at 1062.382 kb on + strand at 1062.382 kb on + strand at 1062.382 kb on + strand at 1062.382 kb on + strand at 1062.383 kb on - strand at 1062.383 kb on - strand at 1062.383 kb on - strand at 1062.383 kb on - strand at 1062.383 kb on - strand at 1062.483 kb on - strand at 1062.483 kb on - strand at 1062.523 kb on - strand at 1062.980 kb on + strand, within Ga0059261_1026 at 1063.596 kb on + strand, within Ga0059261_1026 at 1063.596 kb on + strand, within Ga0059261_1026 at 1063.597 kb on - strand, within Ga0059261_1026 at 1063.597 kb on - strand, within Ga0059261_1026 at 1063.597 kb on - strand, within Ga0059261_1026 at 1063.597 kb on - strand, within Ga0059261_1026 at 1063.597 kb on - strand, within Ga0059261_1026 at 1063.597 kb on - strand at 1063.597 kb on - strand, within Ga0059261_1026 at 1063.597 kb on - strand, within Ga0059261_1026 at 1063.599 kb on - strand, within Ga0059261_1026 at 1063.599 kb on - strand, within Ga0059261_1026 at 1064.200 kb on + strand at 1064.200 kb on + strand at 1064.200 kb on + strand at 1064.201 kb on - strand at 1064.298 kb on + strand at 1064.298 kb on + strand at 1064.298 kb on + strand at 1064.298 kb on + strand at 1064.299 kb on - strand at 1064.299 kb on - strand at 1064.333 kb on + strand, within Ga0059261_1027 at 1064.333 kb on + strand, within Ga0059261_1027 at 1064.573 kb on + strand, within Ga0059261_1027 at 1064.574 kb on - strand, within Ga0059261_1027 at 1064.574 kb on - strand, within Ga0059261_1027 at 1064.574 kb on - strand, within Ga0059261_1027 at 1064.574 kb on - strand, within Ga0059261_1027 at 1064.599 kb on + strand, within Ga0059261_1027 at 1064.600 kb on - strand, within Ga0059261_1027 at 1064.684 kb on + strand, within Ga0059261_1027 at 1064.685 kb on - strand, within Ga0059261_1027 at 1064.717 kb on + strand, within Ga0059261_1027 at 1064.717 kb on + strand, within Ga0059261_1027 at 1064.718 kb on - strand, within Ga0059261_1027 at 1064.718 kb on - strand, within Ga0059261_1027 at 1064.724 kb on - strand, within Ga0059261_1027 at 1064.724 kb on - strand, within Ga0059261_1027 at 1064.945 kb on + strand, within Ga0059261_1027 at 1064.945 kb on + strand, within Ga0059261_1027 at 1064.945 kb on + strand, within Ga0059261_1027 at 1064.945 kb on + strand, within Ga0059261_1027 at 1064.945 kb on + strand, within Ga0059261_1027 at 1064.945 kb on + strand, within Ga0059261_1027 at 1064.945 kb on + strand, within Ga0059261_1027 at 1064.945 kb on + strand, within Ga0059261_1027 at 1064.945 kb on + strand, within Ga0059261_1027 at 1064.945 kb on + strand, within Ga0059261_1027 at 1064.946 kb on - strand, within Ga0059261_1027 at 1064.946 kb on - strand, within Ga0059261_1027 at 1064.946 kb on - strand, within Ga0059261_1027 at 1064.946 kb on - strand, within Ga0059261_1027 at 1064.946 kb on - strand, within Ga0059261_1027 at 1064.946 kb on - strand, within Ga0059261_1027 at 1064.946 kb on - strand, within Ga0059261_1027 at 1064.946 kb on - strand, within Ga0059261_1027 at 1064.946 kb on - strand, within Ga0059261_1027 at 1064.946 kb on - strand, within Ga0059261_1027 at 1064.947 kb on + strand, within Ga0059261_1027 at 1064.947 kb on + strand, within Ga0059261_1027 at 1064.947 kb on + strand, within Ga0059261_1027 at 1064.947 kb on + strand, within Ga0059261_1027 at 1064.985 kb on - strand, within Ga0059261_1027 at 1064.985 kb on - strand, within Ga0059261_1027 at 1064.985 kb on - strand, within Ga0059261_1027 at 1064.985 kb on - strand, within Ga0059261_1027
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 1.25 mM remove 1,062,238 + Ga0059261_1025 0.83 -0.4 1,062,238 + Ga0059261_1025 0.83 -1.4 1,062,238 + Ga0059261_1025 0.83 -1.8 1,062,239 - +0.2 1,062,256 + -0.4 1,062,382 + -1.1 1,062,382 + +0.0 1,062,382 + -0.3 1,062,382 + +0.1 1,062,382 + -0.1 1,062,382 + -0.1 1,062,383 - -0.3 1,062,383 - +0.1 1,062,383 - -0.4 1,062,383 - -1.0 1,062,383 - -0.2 1,062,483 - -1.0 1,062,483 - -0.3 1,062,523 - -1.8 1,062,980 + Ga0059261_1026 0.27 -1.4 1,063,596 + Ga0059261_1026 0.64 +1.2 1,063,596 + Ga0059261_1026 0.64 -1.2 1,063,597 - Ga0059261_1026 0.64 -1.5 1,063,597 - Ga0059261_1026 0.64 -1.2 1,063,597 - Ga0059261_1026 0.64 -0.8 1,063,597 - Ga0059261_1026 0.64 -0.9 1,063,597 - Ga0059261_1026 0.64 +0.2 1,063,597 - +0.2 1,063,597 - Ga0059261_1026 0.64 -1.8 1,063,597 - Ga0059261_1026 0.64 -1.1 1,063,599 - Ga0059261_1026 0.64 -0.3 1,063,599 - Ga0059261_1026 0.64 -1.2 1,064,200 + -0.0 1,064,200 + -0.8 1,064,200 + +0.1 1,064,201 - -0.3 1,064,298 + -0.2 1,064,298 + -2.6 1,064,298 + -0.9 1,064,298 + +0.6 1,064,299 - -0.1 1,064,299 - -0.2 1,064,333 + Ga0059261_1027 0.13 -0.1 1,064,333 + Ga0059261_1027 0.13 -0.3 1,064,573 + Ga0059261_1027 0.35 -1.1 1,064,574 - Ga0059261_1027 0.35 -1.0 1,064,574 - Ga0059261_1027 0.35 -0.7 1,064,574 - Ga0059261_1027 0.35 +0.4 1,064,574 - Ga0059261_1027 0.35 -0.2 1,064,599 + Ga0059261_1027 0.37 -0.4 1,064,600 - Ga0059261_1027 0.37 -0.6 1,064,684 + Ga0059261_1027 0.45 +0.2 1,064,685 - Ga0059261_1027 0.45 -0.2 1,064,717 + Ga0059261_1027 0.48 -0.3 1,064,717 + Ga0059261_1027 0.48 +0.4 1,064,718 - Ga0059261_1027 0.48 -0.6 1,064,718 - Ga0059261_1027 0.48 +0.2 1,064,724 - Ga0059261_1027 0.49 +0.5 1,064,724 - Ga0059261_1027 0.49 +0.8 1,064,945 + Ga0059261_1027 0.69 +0.4 1,064,945 + Ga0059261_1027 0.69 -0.3 1,064,945 + Ga0059261_1027 0.69 +0.0 1,064,945 + Ga0059261_1027 0.69 +0.6 1,064,945 + Ga0059261_1027 0.69 -0.1 1,064,945 + Ga0059261_1027 0.69 +0.4 1,064,945 + Ga0059261_1027 0.69 -0.2 1,064,945 + Ga0059261_1027 0.69 +0.6 1,064,945 + Ga0059261_1027 0.69 -0.5 1,064,945 + Ga0059261_1027 0.69 -0.6 1,064,946 - Ga0059261_1027 0.69 -0.5 1,064,946 - Ga0059261_1027 0.69 +2.2 1,064,946 - Ga0059261_1027 0.69 -0.4 1,064,946 - Ga0059261_1027 0.69 +0.6 1,064,946 - Ga0059261_1027 0.69 +0.5 1,064,946 - Ga0059261_1027 0.69 +0.5 1,064,946 - Ga0059261_1027 0.69 -0.7 1,064,946 - Ga0059261_1027 0.69 +0.2 1,064,946 - Ga0059261_1027 0.69 +0.7 1,064,946 - Ga0059261_1027 0.69 -0.2 1,064,947 + Ga0059261_1027 0.69 +0.2 1,064,947 + Ga0059261_1027 0.69 -0.0 1,064,947 + Ga0059261_1027 0.69 +0.5 1,064,947 + Ga0059261_1027 0.69 -0.3 1,064,985 - Ga0059261_1027 0.73 -0.3 1,064,985 - Ga0059261_1027 0.73 -0.1 1,064,985 - Ga0059261_1027 0.73 +1.8 1,064,985 - Ga0059261_1027 0.73 -1.0
Or see this region's nucleotide sequence