Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_27610 and AO356_27615 are separated by 567 nucleotides AO356_27615 and AO356_27620 are separated by 197 nucleotides
AO356_27610: AO356_27610 - RND transporter, at 6,300,562 to 6,301,983
_27610
AO356_27615: AO356_27615 - hypothetical protein, at 6,302,551 to 6,303,609
_27615
AO356_27620: AO356_27620 - circadian clock protein KaiC, at 6,303,807 to 6,305,309
_27620
Position (kb)
6302
6303
6304 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 6301.596 kb on + strand, within AO356_27610 at 6301.597 kb on - strand, within AO356_27610 at 6301.933 kb on + strand at 6302.729 kb on - strand, within AO356_27615 at 6303.011 kb on - strand, within AO356_27615 at 6303.088 kb on + strand, within AO356_27615 at 6303.284 kb on - strand, within AO356_27615 at 6303.511 kb on + strand at 6303.512 kb on - strand at 6303.669 kb on + strand at 6303.670 kb on - strand at 6303.685 kb on + strand at 6303.686 kb on - strand at 6303.706 kb on - strand at 6303.802 kb on + strand at 6303.813 kb on - strand at 6303.818 kb on + strand at 6303.993 kb on + strand, within AO356_27620 at 6303.994 kb on - strand, within AO356_27620 at 6303.994 kb on - strand, within AO356_27620 at 6303.994 kb on - strand, within AO356_27620 at 6304.067 kb on + strand, within AO356_27620 at 6304.067 kb on + strand, within AO356_27620 at 6304.068 kb on - strand, within AO356_27620 at 6304.294 kb on - strand, within AO356_27620 at 6304.364 kb on - strand, within AO356_27620 at 6304.364 kb on - strand, within AO356_27620 at 6304.414 kb on - strand, within AO356_27620 at 6304.464 kb on + strand, within AO356_27620 at 6304.551 kb on + strand, within AO356_27620
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 6,301,596 + AO356_27610 0.73 +0.4 6,301,597 - AO356_27610 0.73 -0.1 6,301,933 + +0.7 6,302,729 - AO356_27615 0.17 -0.8 6,303,011 - AO356_27615 0.43 +0.9 6,303,088 + AO356_27615 0.51 -0.3 6,303,284 - AO356_27615 0.69 -2.9 6,303,511 + -1.3 6,303,512 - -0.5 6,303,669 + +0.4 6,303,670 - -1.4 6,303,685 + -1.4 6,303,686 - -0.1 6,303,706 - -1.1 6,303,802 + +1.0 6,303,813 - -0.9 6,303,818 + +0.2 6,303,993 + AO356_27620 0.12 -0.6 6,303,994 - AO356_27620 0.12 -0.6 6,303,994 - AO356_27620 0.12 +0.5 6,303,994 - AO356_27620 0.12 +0.2 6,304,067 + AO356_27620 0.17 -0.6 6,304,067 + AO356_27620 0.17 -0.9 6,304,068 - AO356_27620 0.17 -0.3 6,304,294 - AO356_27620 0.32 +0.2 6,304,364 - AO356_27620 0.37 +0.4 6,304,364 - AO356_27620 0.37 -1.2 6,304,414 - AO356_27620 0.40 -1.3 6,304,464 + AO356_27620 0.44 -0.7 6,304,551 + AO356_27620 0.50 +0.9
Or see this region's nucleotide sequence