Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_26435 and AO356_26440 are separated by 114 nucleotides AO356_26440 and AO356_26445 overlap by 4 nucleotides
AO356_26435: AO356_26435 - 6-aminohexanoate hydrolase, at 5,986,267 to 5,987,703
_26435
AO356_26440: AO356_26440 - TetR family transcriptional regulator, at 5,987,818 to 5,988,390
_26440
AO356_26445: AO356_26445 - FAD-dependent oxidoreductase, at 5,988,387 to 5,989,493
_26445
Position (kb) 5987
5988
5989 Strain fitness (log2 ratio) -2
-1
0
1 at 5986.848 kb on + strand, within AO356_26435 at 5986.985 kb on + strand, within AO356_26435 at 5986.986 kb on - strand, within AO356_26435 at 5987.001 kb on + strand, within AO356_26435 at 5987.001 kb on + strand, within AO356_26435 at 5987.002 kb on - strand, within AO356_26435 at 5987.050 kb on + strand, within AO356_26435 at 5987.110 kb on + strand, within AO356_26435 at 5987.111 kb on - strand, within AO356_26435 at 5987.189 kb on - strand, within AO356_26435 at 5987.231 kb on - strand, within AO356_26435 at 5987.324 kb on - strand, within AO356_26435 at 5987.324 kb on - strand, within AO356_26435 at 5987.324 kb on - strand, within AO356_26435 at 5987.340 kb on + strand, within AO356_26435 at 5987.340 kb on + strand, within AO356_26435 at 5987.415 kb on + strand, within AO356_26435 at 5987.416 kb on - strand, within AO356_26435 at 5987.678 kb on + strand at 5987.678 kb on + strand at 5987.739 kb on - strand at 5987.843 kb on + strand at 5987.844 kb on - strand at 5987.844 kb on - strand at 5987.844 kb on - strand at 5987.902 kb on - strand, within AO356_26440 at 5988.127 kb on + strand, within AO356_26440 at 5988.128 kb on - strand, within AO356_26440 at 5988.128 kb on - strand, within AO356_26440 at 5988.128 kb on - strand, within AO356_26440 at 5988.129 kb on + strand, within AO356_26440 at 5988.292 kb on + strand, within AO356_26440 at 5988.602 kb on - strand, within AO356_26445 at 5988.619 kb on + strand, within AO356_26445 at 5988.619 kb on + strand, within AO356_26445 at 5988.620 kb on - strand, within AO356_26445 at 5988.797 kb on - strand, within AO356_26445 at 5988.797 kb on - strand, within AO356_26445 at 5988.797 kb on - strand, within AO356_26445 at 5988.985 kb on + strand, within AO356_26445 at 5988.986 kb on - strand, within AO356_26445 at 5989.076 kb on - strand, within AO356_26445 at 5989.140 kb on + strand, within AO356_26445 at 5989.141 kb on - strand, within AO356_26445 at 5989.141 kb on - strand, within AO356_26445 at 5989.141 kb on - strand, within AO356_26445 at 5989.141 kb on - strand, within AO356_26445 at 5989.235 kb on + strand, within AO356_26445 at 5989.236 kb on - strand, within AO356_26445 at 5989.270 kb on + strand, within AO356_26445 at 5989.328 kb on - strand, within AO356_26445
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 5,986,848 + AO356_26435 0.40 -0.5 5,986,985 + AO356_26435 0.50 -2.0 5,986,986 - AO356_26435 0.50 -0.1 5,987,001 + AO356_26435 0.51 +1.1 5,987,001 + AO356_26435 0.51 -0.3 5,987,002 - AO356_26435 0.51 -0.4 5,987,050 + AO356_26435 0.54 -0.2 5,987,110 + AO356_26435 0.59 -0.3 5,987,111 - AO356_26435 0.59 +1.4 5,987,189 - AO356_26435 0.64 +0.5 5,987,231 - AO356_26435 0.67 -1.3 5,987,324 - AO356_26435 0.74 +0.5 5,987,324 - AO356_26435 0.74 +0.1 5,987,324 - AO356_26435 0.74 +0.5 5,987,340 + AO356_26435 0.75 -1.3 5,987,340 + AO356_26435 0.75 -0.2 5,987,415 + AO356_26435 0.80 +0.9 5,987,416 - AO356_26435 0.80 -0.1 5,987,678 + +0.7 5,987,678 + +0.5 5,987,739 - -0.0 5,987,843 + +0.8 5,987,844 - +1.7 5,987,844 - +0.2 5,987,844 - +0.5 5,987,902 - AO356_26440 0.15 -1.5 5,988,127 + AO356_26440 0.54 -0.8 5,988,128 - AO356_26440 0.54 -2.6 5,988,128 - AO356_26440 0.54 -0.6 5,988,128 - AO356_26440 0.54 +0.3 5,988,129 + AO356_26440 0.54 -0.9 5,988,292 + AO356_26440 0.83 +0.5 5,988,602 - AO356_26445 0.19 -0.2 5,988,619 + AO356_26445 0.21 +0.5 5,988,619 + AO356_26445 0.21 -0.0 5,988,620 - AO356_26445 0.21 -2.2 5,988,797 - AO356_26445 0.37 -0.2 5,988,797 - AO356_26445 0.37 +0.1 5,988,797 - AO356_26445 0.37 +0.2 5,988,985 + AO356_26445 0.54 -0.6 5,988,986 - AO356_26445 0.54 +0.2 5,989,076 - AO356_26445 0.62 -0.2 5,989,140 + AO356_26445 0.68 +0.2 5,989,141 - AO356_26445 0.68 -0.4 5,989,141 - AO356_26445 0.68 +0.1 5,989,141 - AO356_26445 0.68 -0.3 5,989,141 - AO356_26445 0.68 -0.2 5,989,235 + AO356_26445 0.77 -0.2 5,989,236 - AO356_26445 0.77 +0.6 5,989,270 + AO356_26445 0.80 -0.2 5,989,328 - AO356_26445 0.85 -0.5
Or see this region's nucleotide sequence