Experiment: perchlorate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_14815 and AO356_14820 are separated by 81 nucleotides AO356_14820 and AO356_14825 are separated by 98 nucleotides
AO356_14815: AO356_14815 - Cro/Cl family transcriptional regulator, at 3,350,239 to 3,353,538
_14815
AO356_14820: AO356_14820 - Isochorismatase, at 3,353,620 to 3,354,174
_14820
AO356_14825: AO356_14825 - AraC family transcriptional regulator, at 3,354,273 to 3,355,268
_14825
Position (kb)
3353
3354
3355 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3352.705 kb on + strand, within AO356_14815 at 3352.705 kb on + strand, within AO356_14815 at 3352.705 kb on + strand, within AO356_14815 at 3352.705 kb on + strand, within AO356_14815 at 3352.705 kb on + strand, within AO356_14815 at 3352.705 kb on + strand, within AO356_14815 at 3352.706 kb on - strand, within AO356_14815 at 3352.708 kb on + strand, within AO356_14815 at 3352.708 kb on + strand, within AO356_14815 at 3352.709 kb on - strand, within AO356_14815 at 3352.709 kb on - strand, within AO356_14815 at 3352.709 kb on - strand, within AO356_14815 at 3352.709 kb on - strand, within AO356_14815 at 3352.709 kb on - strand, within AO356_14815 at 3352.736 kb on - strand, within AO356_14815 at 3352.758 kb on - strand, within AO356_14815 at 3352.831 kb on + strand, within AO356_14815 at 3352.831 kb on + strand, within AO356_14815 at 3352.832 kb on - strand, within AO356_14815 at 3353.149 kb on + strand, within AO356_14815 at 3353.149 kb on + strand, within AO356_14815 at 3353.149 kb on + strand, within AO356_14815 at 3353.150 kb on - strand, within AO356_14815 at 3353.167 kb on + strand, within AO356_14815 at 3353.168 kb on - strand, within AO356_14815 at 3353.168 kb on - strand, within AO356_14815 at 3353.328 kb on + strand at 3353.329 kb on - strand at 3353.329 kb on - strand at 3353.604 kb on + strand at 3353.605 kb on - strand at 3353.621 kb on + strand at 3353.622 kb on - strand at 3353.622 kb on - strand at 3353.667 kb on - strand at 3353.950 kb on + strand, within AO356_14820 at 3353.951 kb on - strand, within AO356_14820 at 3354.131 kb on + strand at 3354.131 kb on + strand at 3354.131 kb on + strand at 3354.131 kb on + strand at 3354.131 kb on + strand at 3354.131 kb on + strand at 3354.132 kb on - strand at 3354.132 kb on - strand at 3354.132 kb on - strand at 3354.132 kb on - strand at 3354.152 kb on - strand at 3354.199 kb on + strand at 3354.210 kb on + strand at 3354.210 kb on + strand at 3354.253 kb on + strand at 3354.253 kb on + strand at 3354.253 kb on + strand at 3354.253 kb on + strand at 3354.254 kb on - strand at 3354.254 kb on - strand at 3354.254 kb on - strand at 3354.254 kb on - strand at 3354.315 kb on + strand at 3354.316 kb on - strand at 3354.316 kb on - strand at 3354.316 kb on - strand at 3354.896 kb on + strand, within AO356_14825 at 3355.072 kb on - strand, within AO356_14825
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 75 mM remove 3,352,705 + AO356_14815 0.75 +0.1 3,352,705 + AO356_14815 0.75 +1.9 3,352,705 + AO356_14815 0.75 -0.2 3,352,705 + AO356_14815 0.75 -0.3 3,352,705 + AO356_14815 0.75 +0.2 3,352,705 + AO356_14815 0.75 +0.4 3,352,706 - AO356_14815 0.75 -0.2 3,352,708 + AO356_14815 0.75 +0.0 3,352,708 + AO356_14815 0.75 +0.7 3,352,709 - AO356_14815 0.75 -1.4 3,352,709 - AO356_14815 0.75 -0.7 3,352,709 - AO356_14815 0.75 -0.1 3,352,709 - AO356_14815 0.75 -0.2 3,352,709 - AO356_14815 0.75 -0.3 3,352,736 - AO356_14815 0.76 +0.9 3,352,758 - AO356_14815 0.76 -0.0 3,352,831 + AO356_14815 0.79 +0.2 3,352,831 + AO356_14815 0.79 -0.8 3,352,832 - AO356_14815 0.79 +0.0 3,353,149 + AO356_14815 0.88 -0.0 3,353,149 + AO356_14815 0.88 +1.0 3,353,149 + AO356_14815 0.88 -0.9 3,353,150 - AO356_14815 0.88 -0.1 3,353,167 + AO356_14815 0.89 -0.1 3,353,168 - AO356_14815 0.89 -0.3 3,353,168 - AO356_14815 0.89 +0.0 3,353,328 + -0.1 3,353,329 - -0.6 3,353,329 - +1.3 3,353,604 + -0.4 3,353,605 - +0.9 3,353,621 + +0.3 3,353,622 - -2.3 3,353,622 - +0.0 3,353,667 - +0.2 3,353,950 + AO356_14820 0.59 +0.2 3,353,951 - AO356_14820 0.60 +1.4 3,354,131 + -0.5 3,354,131 + +0.7 3,354,131 + +0.1 3,354,131 + -0.4 3,354,131 + -0.3 3,354,131 + +0.6 3,354,132 - +0.6 3,354,132 - -0.6 3,354,132 - +0.3 3,354,132 - +0.2 3,354,152 - +0.6 3,354,199 + -0.9 3,354,210 + +0.5 3,354,210 + -0.0 3,354,253 + -0.7 3,354,253 + -0.6 3,354,253 + +1.3 3,354,253 + -0.3 3,354,254 - +0.2 3,354,254 - -0.2 3,354,254 - -0.0 3,354,254 - -0.1 3,354,315 + +0.4 3,354,316 - -0.0 3,354,316 - +0.0 3,354,316 - -0.2 3,354,896 + AO356_14825 0.63 -1.4 3,355,072 - AO356_14825 0.80 -0.0
Or see this region's nucleotide sequence