Experiment: Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_26160 and AO356_26165 are separated by 126 nucleotides AO356_26165 and AO356_26170 are separated by 128 nucleotides
AO356_26160: AO356_26160 - MFS transporter, at 5,920,651 to 5,921,946
_26160
AO356_26165: AO356_26165 - LysR family transcriptional regulator, at 5,922,073 to 5,923,017
_26165
AO356_26170: AO356_26170 - hypothetical protein, at 5,923,146 to 5,928,269
_26170
Position (kb) 5922
5923
5924 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5921.166 kb on - strand, within AO356_26160 at 5921.166 kb on - strand, within AO356_26160 at 5921.173 kb on + strand, within AO356_26160 at 5921.173 kb on + strand, within AO356_26160 at 5921.174 kb on - strand, within AO356_26160 at 5921.204 kb on + strand, within AO356_26160 at 5921.204 kb on + strand, within AO356_26160 at 5921.219 kb on + strand, within AO356_26160 at 5921.364 kb on - strand, within AO356_26160 at 5921.514 kb on - strand, within AO356_26160 at 5921.558 kb on + strand, within AO356_26160 at 5921.558 kb on + strand, within AO356_26160 at 5921.559 kb on - strand, within AO356_26160 at 5921.627 kb on + strand, within AO356_26160 at 5921.876 kb on + strand at 5921.877 kb on - strand at 5921.877 kb on - strand at 5921.877 kb on - strand at 5921.877 kb on - strand at 5921.967 kb on + strand at 5921.967 kb on + strand at 5921.967 kb on + strand at 5921.968 kb on - strand at 5921.991 kb on + strand at 5921.992 kb on - strand at 5922.580 kb on + strand, within AO356_26165 at 5922.580 kb on + strand, within AO356_26165 at 5922.581 kb on - strand, within AO356_26165 at 5922.786 kb on + strand, within AO356_26165 at 5922.787 kb on - strand, within AO356_26165 at 5922.787 kb on - strand, within AO356_26165 at 5923.152 kb on - strand at 5923.316 kb on + strand at 5923.317 kb on - strand at 5923.396 kb on + strand at 5923.473 kb on + strand at 5923.473 kb on + strand at 5923.473 kb on + strand at 5923.473 kb on + strand at 5923.474 kb on - strand at 5923.554 kb on + strand at 5923.555 kb on - strand at 5923.713 kb on + strand, within AO356_26170 at 5923.713 kb on + strand, within AO356_26170 at 5923.722 kb on + strand, within AO356_26170 at 5923.722 kb on + strand, within AO356_26170 at 5923.722 kb on + strand, within AO356_26170 at 5923.722 kb on + strand, within AO356_26170 at 5923.723 kb on - strand, within AO356_26170 at 5923.723 kb on - strand, within AO356_26170 at 5923.723 kb on - strand, within AO356_26170 at 5923.744 kb on - strand, within AO356_26170 at 5923.905 kb on + strand, within AO356_26170
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.08 mM remove 5,921,166 - AO356_26160 0.40 +0.6 5,921,166 - AO356_26160 0.40 +0.1 5,921,173 + AO356_26160 0.40 -1.1 5,921,173 + AO356_26160 0.40 +1.1 5,921,174 - AO356_26160 0.40 -0.1 5,921,204 + AO356_26160 0.43 -0.8 5,921,204 + AO356_26160 0.43 -2.6 5,921,219 + AO356_26160 0.44 -0.4 5,921,364 - AO356_26160 0.55 -0.5 5,921,514 - AO356_26160 0.67 -0.9 5,921,558 + AO356_26160 0.70 +0.1 5,921,558 + AO356_26160 0.70 -0.8 5,921,559 - AO356_26160 0.70 +1.2 5,921,627 + AO356_26160 0.75 +1.3 5,921,876 + -0.8 5,921,877 - -0.2 5,921,877 - +0.9 5,921,877 - +0.6 5,921,877 - +0.5 5,921,967 + -1.1 5,921,967 + +1.0 5,921,967 + -0.6 5,921,968 - -0.5 5,921,991 + +0.2 5,921,992 - +0.3 5,922,580 + AO356_26165 0.54 -0.2 5,922,580 + AO356_26165 0.54 -0.5 5,922,581 - AO356_26165 0.54 -1.1 5,922,786 + AO356_26165 0.75 -1.5 5,922,787 - AO356_26165 0.76 -1.2 5,922,787 - AO356_26165 0.76 +0.1 5,923,152 - -0.8 5,923,316 + -0.5 5,923,317 - +0.8 5,923,396 + -0.8 5,923,473 + +0.3 5,923,473 + +0.2 5,923,473 + +0.4 5,923,473 + -1.1 5,923,474 - +2.0 5,923,554 + +0.2 5,923,555 - +0.2 5,923,713 + AO356_26170 0.11 -0.0 5,923,713 + AO356_26170 0.11 +1.1 5,923,722 + AO356_26170 0.11 +0.1 5,923,722 + AO356_26170 0.11 -0.8 5,923,722 + AO356_26170 0.11 -0.2 5,923,722 + AO356_26170 0.11 +1.1 5,923,723 - AO356_26170 0.11 +0.1 5,923,723 - AO356_26170 0.11 +0.3 5,923,723 - AO356_26170 0.11 +0.2 5,923,744 - AO356_26170 0.12 -0.8 5,923,905 + AO356_26170 0.15 +0.1
Or see this region's nucleotide sequence