Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1314

Experiment: Polymyxin B sulfate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Polymyxin B sulfate 0.0001 mg/ml
1,413,836	+		Psest_1312	0.69	+2.6
1,413,836	+		Psest_1312	0.69	-0.4
1,413,837	-		Psest_1312	0.69	+0.1
1,413,837	-		Psest_1312	0.69	+1.3
1,414,113	+				+0.6
1,414,113	+				+0.2
1,414,115	+				-2.4
1,414,115	+				-2.4
1,414,115	+				-0.4
1,414,115	+				+0.4
1,414,116	-				+2.1
1,414,179	+				-0.1
1,414,179	+				-0.1
1,414,179	+				+1.0
1,414,179	+				+0.2
1,414,179	+				-1.4
1,414,179	+				+2.7
1,414,180	-				+0.1
1,414,180	-				-0.8
1,414,180	-				+0.5
1,414,180	-				-1.8
1,414,180	-				+1.0
1,414,180	-				+1.9
1,414,180	-				+1.3
1,414,180	-				-0.4
1,414,280	+				+1.7
1,414,281	-				-1.3
1,414,281	-				+0.7
1,414,364	+				+0.2
1,414,403	+				+0.4
1,414,404	-				+0.6
1,414,479	+		Psest_1313	0.31	+1.8
1,414,479	+		Psest_1313	0.31	+0.2
1,414,479	+		Psest_1313	0.31	+2.5
1,414,480	-		Psest_1313	0.32	-0.8
1,414,480	-		Psest_1313	0.32	+1.0
1,414,848	+				-0.9
1,414,848	+				+1.3
1,414,956	-		Psest_1314	0.13	+2.2
1,414,973	+		Psest_1314	0.14	+1.8
1,414,973	+		Psest_1314	0.14	-2.3
1,414,974	-		Psest_1314	0.14	+1.2
1,414,974	-		Psest_1314	0.14	+0.6
1,415,070	+		Psest_1314	0.20	+0.6
1,415,186	+		Psest_1314	0.27	+0.2
1,415,186	+		Psest_1314	0.27	+0.3
1,415,186	+		Psest_1314	0.27	-1.6
1,415,186	+		Psest_1314	0.27	-2.0
1,415,186	+		Psest_1314	0.27	+1.7
1,415,187	-		Psest_1314	0.27	+0.6
1,415,229	+		Psest_1314	0.30	+2.2
1,415,229	+		Psest_1314	0.30	+1.0
1,415,230	-		Psest_1314	0.30	+2.2
1,415,230	-		Psest_1314	0.30	+3.1
1,415,273	+		Psest_1314	0.33	-2.3
1,415,288	+		Psest_1314	0.34	+1.4
1,415,289	-		Psest_1314	0.34	-2.9
1,415,466	+		Psest_1314	0.45	-0.4
1,415,563	+		Psest_1314	0.51	+0.2
1,415,563	+		Psest_1314	0.51	+1.3
1,415,564	-		Psest_1314	0.51	+1.5
1,415,564	-		Psest_1314	0.51	+1.2
1,415,623	+		Psest_1314	0.55	-0.1
1,415,623	+		Psest_1314	0.55	-0.1
1,415,623	+		Psest_1314	0.55	+1.8
1,415,623	+		Psest_1314	0.55	+0.2
1,415,623	+		Psest_1314	0.55	-0.4
1,415,623	+		Psest_1314	0.55	-0.2
1,415,624	-		Psest_1314	0.55	+0.8
1,415,624	-		Psest_1314	0.55	-0.4
1,415,624	-		Psest_1314	0.55	-1.6
1,415,658	-		Psest_1314	0.57	-0.6
1,415,658	-		Psest_1314	0.57	-1.6
1,415,658	-		Psest_1314	0.57	+0.7
1,415,658	-		Psest_1314	0.57	+0.0
1,415,896	+		Psest_1314	0.72	+0.7
1,415,896	+		Psest_1314	0.72	+1.3
1,415,925	-		Psest_1314	0.74	+1.1
1,415,937	-		Psest_1314	0.75	+0.2
1,415,963	+		Psest_1314	0.76	+0.2
1,416,044	+		Psest_1314	0.81	+1.5
1,416,045	-		Psest_1314	0.81	+0.9
1,416,045	-		Psest_1314	0.81	+0.7
1,416,045	-		Psest_1314	0.81	+1.7
1,416,045	-		Psest_1314	0.81	+0.2
1,416,045	-		Psest_1314	0.81	+0.7
1,416,045	-		Psest_1314	0.81	+0.0
1,416,045	-		Psest_1314	0.81	+2.6
1,416,061	+		Psest_1314	0.82	+4.1
1,416,062	-		Psest_1314	0.82	-0.7
1,416,116	+		Psest_1314	0.86	-0.4
1,416,116	+		Psest_1314	0.86	+2.2
1,416,116	+		Psest_1314	0.86	-0.8
1,416,116	+		Psest_1314	0.86	-2.0
1,416,161	+		Psest_1314	0.89	-1.1
1,416,162	-		Psest_1314	0.89	+0.4
1,416,162	-		Psest_1314	0.89	-1.6
1,416,189	-				+1.5
1,416,189	-				+0.2
1,416,189	-				+1.6
1,416,289	+				+1.5
1,416,322	+				-0.4
1,416,322	+				+3.2
1,416,322	+				+1.7
1,416,323	-				-1.6
1,416,323	-				-2.6
1,416,323	-				+0.5
1,416,379	+		Psest_1315	0.17	+1.1
1,416,612	+				+0.3
1,416,613	-				-2.8
1,416,613	-				-2.2
1,416,620	+				+0.2
1,416,639	+				+2.0
1,416,646	+				-0.8
1,416,989	+		Psest_1316	0.27	-0.1
1,416,989	+		Psest_1316	0.27	-1.4
1,416,989	+		Psest_1316	0.27	-0.1
1,416,989	+		Psest_1316	0.27	+2.1
1,416,989	+		Psest_1316	0.27	+1.0
1,416,990	-		Psest_1316	0.27	-1.4
1,416,990	-		Psest_1316	0.27	+2.0
1,416,990	-		Psest_1316	0.27	+0.2
1,416,990	-		Psest_1316	0.27	-0.5
1,416,990	-		Psest_1316	0.27	-1.1
1,417,002	-		Psest_1316	0.28	-1.8
1,417,037	+		Psest_1316	0.30	+1.6
1,417,038	-		Psest_1316	0.30	-1.6
1,417,038	-		Psest_1316	0.30	+0.2
1,417,138	+		Psest_1316	0.38	+3.3
1,417,219	-		Psest_1316	0.44	+1.6