Experiment: Chlorite 0.06 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4169 and Psest_4170 are separated by 3 nucleotides Psest_4170 and Psest_4171 are separated by 1 nucleotides Psest_4171 and Psest_4172 overlap by 29 nucleotides
Psest_4169: Psest_4169 - ATPase FliI/YscN family, at 4,347,386 to 4,348,720
_4169
Psest_4170: Psest_4170 - Flagellar biosynthesis/type III secretory pathway protein, at 4,348,724 to 4,349,422
_4170
Psest_4171: Psest_4171 - Flagellar motor switch protein, at 4,349,424 to 4,350,491
_4171
Psest_4172: Psest_4172 - flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF), at 4,350,463 to 4,352,139
_4172
Position (kb) 4349
4350
4351 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4348.457 kb on + strand, within Psest_4169 at 4348.506 kb on + strand, within Psest_4169 at 4348.506 kb on + strand, within Psest_4169 at 4348.506 kb on + strand, within Psest_4169 at 4348.506 kb on + strand, within Psest_4169 at 4348.507 kb on - strand, within Psest_4169 at 4348.572 kb on + strand, within Psest_4169 at 4348.572 kb on + strand, within Psest_4169 at 4348.573 kb on - strand, within Psest_4169 at 4348.573 kb on - strand, within Psest_4169 at 4348.573 kb on - strand, within Psest_4169 at 4348.573 kb on - strand, within Psest_4169 at 4348.928 kb on - strand, within Psest_4170 at 4349.079 kb on + strand, within Psest_4170 at 4349.512 kb on - strand at 4349.722 kb on + strand, within Psest_4171 at 4349.722 kb on + strand, within Psest_4171 at 4349.722 kb on + strand, within Psest_4171 at 4349.722 kb on + strand, within Psest_4171 at 4349.722 kb on + strand, within Psest_4171 at 4349.722 kb on + strand, within Psest_4171 at 4349.722 kb on + strand, within Psest_4171 at 4349.722 kb on + strand, within Psest_4171 at 4349.722 kb on + strand, within Psest_4171 at 4349.722 kb on + strand, within Psest_4171 at 4349.722 kb on + strand, within Psest_4171 at 4349.723 kb on - strand, within Psest_4171 at 4349.723 kb on - strand, within Psest_4171 at 4349.723 kb on - strand, within Psest_4171 at 4349.723 kb on - strand, within Psest_4171 at 4349.723 kb on - strand, within Psest_4171 at 4349.723 kb on - strand, within Psest_4171 at 4349.723 kb on - strand, within Psest_4171 at 4350.124 kb on + strand, within Psest_4171 at 4350.124 kb on + strand, within Psest_4171 at 4350.124 kb on + strand, within Psest_4171 at 4350.124 kb on + strand, within Psest_4171 at 4350.124 kb on + strand, within Psest_4171 at 4350.124 kb on + strand, within Psest_4171 at 4350.124 kb on + strand, within Psest_4171 at 4350.125 kb on - strand, within Psest_4171 at 4350.125 kb on - strand, within Psest_4171 at 4350.125 kb on - strand, within Psest_4171 at 4350.125 kb on - strand, within Psest_4171 at 4350.125 kb on - strand, within Psest_4171 at 4350.191 kb on - strand, within Psest_4171 at 4350.191 kb on - strand, within Psest_4171 at 4350.229 kb on + strand, within Psest_4171 at 4350.229 kb on + strand, within Psest_4171 at 4350.229 kb on + strand, within Psest_4171 at 4350.229 kb on + strand, within Psest_4171 at 4350.230 kb on - strand, within Psest_4171 at 4350.230 kb on - strand, within Psest_4171 at 4350.637 kb on - strand, within Psest_4172 at 4350.637 kb on - strand, within Psest_4172 at 4350.637 kb on - strand, within Psest_4172 at 4351.110 kb on - strand, within Psest_4172 at 4351.428 kb on - strand, within Psest_4172 at 4351.473 kb on + strand, within Psest_4172 at 4351.474 kb on - strand, within Psest_4172
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.06 mM remove 4,348,457 + Psest_4169 0.80 -0.5 4,348,506 + Psest_4169 0.84 +0.7 4,348,506 + Psest_4169 0.84 +0.3 4,348,506 + Psest_4169 0.84 -0.6 4,348,506 + Psest_4169 0.84 -0.3 4,348,507 - Psest_4169 0.84 +1.4 4,348,572 + Psest_4169 0.89 -0.8 4,348,572 + Psest_4169 0.89 -1.5 4,348,573 - Psest_4169 0.89 +0.4 4,348,573 - Psest_4169 0.89 +0.5 4,348,573 - Psest_4169 0.89 -0.8 4,348,573 - Psest_4169 0.89 -0.0 4,348,928 - Psest_4170 0.29 +0.5 4,349,079 + Psest_4170 0.51 -1.0 4,349,512 - +0.4 4,349,722 + Psest_4171 0.28 +0.4 4,349,722 + Psest_4171 0.28 +0.4 4,349,722 + Psest_4171 0.28 +1.0 4,349,722 + Psest_4171 0.28 +0.7 4,349,722 + Psest_4171 0.28 -0.6 4,349,722 + Psest_4171 0.28 +0.4 4,349,722 + Psest_4171 0.28 +1.2 4,349,722 + Psest_4171 0.28 +0.2 4,349,722 + Psest_4171 0.28 -0.0 4,349,722 + Psest_4171 0.28 -0.1 4,349,722 + Psest_4171 0.28 +1.0 4,349,723 - Psest_4171 0.28 -0.0 4,349,723 - Psest_4171 0.28 -0.2 4,349,723 - Psest_4171 0.28 -2.2 4,349,723 - Psest_4171 0.28 +0.2 4,349,723 - Psest_4171 0.28 +0.1 4,349,723 - Psest_4171 0.28 +1.2 4,349,723 - Psest_4171 0.28 -0.5 4,350,124 + Psest_4171 0.66 +0.7 4,350,124 + Psest_4171 0.66 +0.4 4,350,124 + Psest_4171 0.66 -0.3 4,350,124 + Psest_4171 0.66 -0.6 4,350,124 + Psest_4171 0.66 -0.3 4,350,124 + Psest_4171 0.66 +0.2 4,350,124 + Psest_4171 0.66 +0.3 4,350,125 - Psest_4171 0.66 -0.0 4,350,125 - Psest_4171 0.66 +0.4 4,350,125 - Psest_4171 0.66 -0.2 4,350,125 - Psest_4171 0.66 +0.3 4,350,125 - Psest_4171 0.66 -0.2 4,350,191 - Psest_4171 0.72 +0.7 4,350,191 - Psest_4171 0.72 -0.0 4,350,229 + Psest_4171 0.75 -2.0 4,350,229 + Psest_4171 0.75 +1.7 4,350,229 + Psest_4171 0.75 +0.2 4,350,229 + Psest_4171 0.75 +1.0 4,350,230 - Psest_4171 0.75 +0.3 4,350,230 - Psest_4171 0.75 +3.0 4,350,637 - Psest_4172 0.10 -0.0 4,350,637 - Psest_4172 0.10 +0.5 4,350,637 - Psest_4172 0.10 -0.1 4,351,110 - Psest_4172 0.39 +0.8 4,351,428 - Psest_4172 0.58 -1.2 4,351,473 + Psest_4172 0.60 +1.0 4,351,474 - Psest_4172 0.60 -0.4
Or see this region's nucleotide sequence