Experiment: m.b. acetate 175 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1508 and HP15_1509 are separated by 185 nucleotides HP15_1509 and HP15_1510 are separated by 61 nucleotides HP15_1510 and HP15_1511 are separated by 152 nucleotides
HP15_1508: HP15_1508 - ABC transporter ATPase component, at 1,583,940 to 1,585,850
_1508
HP15_1509: HP15_1509 - conserved hypothetical protein, at 1,586,036 to 1,586,515
_1509
HP15_1510: HP15_1510 - UspA domain protein, at 1,586,577 to 1,587,008
_1510
HP15_1511: HP15_1511 - conserved hypothetical protein, secreted, at 1,587,161 to 1,587,979
_1511
Position (kb)
1586
1587
1588 Strain fitness (log2 ratio)
-1
0
1 at 1585.621 kb on - strand, within HP15_1508 at 1585.633 kb on + strand, within HP15_1508 at 1585.689 kb on - strand at 1585.795 kb on + strand at 1585.889 kb on - strand at 1586.183 kb on - strand, within HP15_1509 at 1586.226 kb on - strand, within HP15_1509 at 1586.297 kb on + strand, within HP15_1509 at 1586.333 kb on - strand, within HP15_1509 at 1586.333 kb on - strand, within HP15_1509 at 1586.337 kb on - strand, within HP15_1509 at 1586.346 kb on + strand, within HP15_1509 at 1586.380 kb on + strand, within HP15_1509 at 1586.398 kb on - strand, within HP15_1509 at 1586.619 kb on - strand at 1586.716 kb on - strand, within HP15_1510 at 1586.870 kb on - strand, within HP15_1510 at 1586.906 kb on + strand, within HP15_1510 at 1587.181 kb on + strand at 1587.259 kb on + strand, within HP15_1511 at 1587.435 kb on - strand, within HP15_1511 at 1587.441 kb on + strand, within HP15_1511 at 1587.444 kb on - strand, within HP15_1511 at 1587.543 kb on + strand, within HP15_1511 at 1587.561 kb on - strand, within HP15_1511 at 1587.647 kb on - strand, within HP15_1511 at 1587.783 kb on - strand, within HP15_1511 at 1587.792 kb on + strand, within HP15_1511 at 1587.838 kb on - strand, within HP15_1511 at 1587.838 kb on - strand, within HP15_1511 at 1587.893 kb on + strand, within HP15_1511 at 1587.893 kb on + strand, within HP15_1511
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. acetate 175 mM remove 1,585,621 - HP15_1508 0.88 -1.0 1,585,633 + HP15_1508 0.89 +0.4 1,585,689 - +0.1 1,585,795 + +0.3 1,585,889 - -0.1 1,586,183 - HP15_1509 0.31 +0.0 1,586,226 - HP15_1509 0.40 +1.1 1,586,297 + HP15_1509 0.54 +0.7 1,586,333 - HP15_1509 0.62 -0.3 1,586,333 - HP15_1509 0.62 -0.1 1,586,337 - HP15_1509 0.63 +0.5 1,586,346 + HP15_1509 0.65 +0.0 1,586,380 + HP15_1509 0.72 +1.0 1,586,398 - HP15_1509 0.75 +0.1 1,586,619 - +0.4 1,586,716 - HP15_1510 0.32 -1.3 1,586,870 - HP15_1510 0.68 +0.9 1,586,906 + HP15_1510 0.76 -0.6 1,587,181 + -0.2 1,587,259 + HP15_1511 0.12 -0.2 1,587,435 - HP15_1511 0.33 +0.1 1,587,441 + HP15_1511 0.34 +0.4 1,587,444 - HP15_1511 0.35 +0.3 1,587,543 + HP15_1511 0.47 +0.6 1,587,561 - HP15_1511 0.49 -0.2 1,587,647 - HP15_1511 0.59 -0.2 1,587,783 - HP15_1511 0.76 +0.8 1,587,792 + HP15_1511 0.77 +0.5 1,587,838 - HP15_1511 0.83 +0.4 1,587,838 - HP15_1511 0.83 +0.7 1,587,893 + HP15_1511 0.89 -0.0 1,587,893 + HP15_1511 0.89 +0.4
Or see this region's nucleotide sequence