Experiment: L-Phenylalanine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_5196 and PP_5197 are separated by 115 nucleotides PP_5197 and PP_5198 are separated by 3 nucleotides PP_5198 and PP_5199 overlap by 4 nucleotides
PP_5196: PP_5196 - putative iron(III)|iron ABC transporter, periplasmic iron-binding protein, at 5,928,047 to 5,929,048
_5196
PP_5197: PP_5197 - putative oxidoreductase involved in anerobic synthesis of ubiquinone, FAD/NAD(P)-binding domain, at 5,929,164 to 5,930,387
_5197
PP_5198: PP_5198 - conserved protein of unknown function, at 5,930,391 to 5,930,873
_5198
PP_5199: PP_5199 - 2-octaprenyl-6-methoxyphenyl hydroxylase, at 5,930,870 to 5,932,069
_5199
Position (kb) 5929
5930
5931 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5928.200 kb on - strand, within PP_5196 at 5928.200 kb on - strand, within PP_5196 at 5928.200 kb on - strand, within PP_5196 at 5928.387 kb on + strand, within PP_5196 at 5928.387 kb on + strand, within PP_5196 at 5928.388 kb on - strand, within PP_5196 at 5928.390 kb on + strand, within PP_5196 at 5928.390 kb on + strand, within PP_5196 at 5928.390 kb on + strand, within PP_5196 at 5928.391 kb on - strand, within PP_5196 at 5928.391 kb on - strand, within PP_5196 at 5928.558 kb on + strand, within PP_5196 at 5928.558 kb on + strand, within PP_5196 at 5928.622 kb on - strand, within PP_5196 at 5928.622 kb on - strand, within PP_5196 at 5928.622 kb on - strand, within PP_5196 at 5928.622 kb on - strand, within PP_5196 at 5928.622 kb on - strand, within PP_5196 at 5928.660 kb on + strand, within PP_5196 at 5928.660 kb on + strand, within PP_5196 at 5928.661 kb on - strand, within PP_5196 at 5928.661 kb on - strand, within PP_5196 at 5928.661 kb on - strand, within PP_5196 at 5928.918 kb on + strand, within PP_5196 at 5928.918 kb on + strand, within PP_5196 at 5928.918 kb on + strand, within PP_5196 at 5928.918 kb on + strand, within PP_5196 at 5928.918 kb on + strand, within PP_5196 at 5928.918 kb on + strand, within PP_5196 at 5928.919 kb on - strand, within PP_5196 at 5928.919 kb on - strand, within PP_5196 at 5928.919 kb on - strand, within PP_5196 at 5928.919 kb on - strand, within PP_5196 at 5928.963 kb on + strand at 5928.963 kb on + strand at 5928.964 kb on - strand at 5929.068 kb on + strand at 5929.112 kb on + strand at 5929.112 kb on + strand at 5929.112 kb on + strand at 5929.112 kb on + strand at 5929.112 kb on + strand at 5929.113 kb on - strand at 5929.113 kb on - strand at 5929.113 kb on - strand at 5929.116 kb on + strand at 5929.116 kb on + strand at 5929.117 kb on - strand at 5929.146 kb on + strand at 5929.146 kb on + strand at 5929.146 kb on + strand at 5929.147 kb on - strand at 5930.393 kb on - strand at 5930.428 kb on - strand at 5930.436 kb on - strand at 5930.663 kb on - strand, within PP_5198 at 5930.663 kb on - strand, within PP_5198 at 5930.663 kb on - strand, within PP_5198 at 5930.663 kb on - strand, within PP_5198 at 5930.663 kb on - strand, within PP_5198 at 5930.684 kb on - strand, within PP_5198 at 5930.714 kb on - strand, within PP_5198 at 5930.804 kb on - strand, within PP_5198 at 5930.804 kb on - strand, within PP_5198 at 5930.804 kb on - strand, within PP_5198
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine 5 mM (C) remove 5,928,200 - PP_5196 0.15 -0.1 5,928,200 - PP_5196 0.15 -0.9 5,928,200 - PP_5196 0.15 +0.4 5,928,387 + PP_5196 0.34 +0.3 5,928,387 + PP_5196 0.34 -0.3 5,928,388 - PP_5196 0.34 +0.6 5,928,390 + PP_5196 0.34 -0.8 5,928,390 + PP_5196 0.34 +0.7 5,928,390 + PP_5196 0.34 -1.1 5,928,391 - PP_5196 0.34 +0.4 5,928,391 - PP_5196 0.34 +0.1 5,928,558 + PP_5196 0.51 +0.2 5,928,558 + PP_5196 0.51 +0.9 5,928,622 - PP_5196 0.57 -0.7 5,928,622 - PP_5196 0.57 +0.7 5,928,622 - PP_5196 0.57 -0.4 5,928,622 - PP_5196 0.57 +0.2 5,928,622 - PP_5196 0.57 -0.4 5,928,660 + PP_5196 0.61 +0.8 5,928,660 + PP_5196 0.61 +0.6 5,928,661 - PP_5196 0.61 +0.3 5,928,661 - PP_5196 0.61 +1.1 5,928,661 - PP_5196 0.61 +0.7 5,928,918 + PP_5196 0.87 +0.1 5,928,918 + PP_5196 0.87 -1.6 5,928,918 + PP_5196 0.87 +0.5 5,928,918 + PP_5196 0.87 -0.3 5,928,918 + PP_5196 0.87 +0.4 5,928,918 + PP_5196 0.87 -1.6 5,928,919 - PP_5196 0.87 +0.4 5,928,919 - PP_5196 0.87 -3.0 5,928,919 - PP_5196 0.87 -1.4 5,928,919 - PP_5196 0.87 +0.1 5,928,963 + +0.0 5,928,963 + -0.4 5,928,964 - -0.2 5,929,068 + -1.3 5,929,112 + -0.4 5,929,112 + +0.8 5,929,112 + -2.3 5,929,112 + -0.3 5,929,112 + +1.4 5,929,113 - +0.6 5,929,113 - -0.5 5,929,113 - +0.8 5,929,116 + -0.4 5,929,116 + +1.0 5,929,117 - +2.0 5,929,146 + +1.0 5,929,146 + +0.1 5,929,146 + +0.6 5,929,147 - -0.4 5,930,393 - -1.1 5,930,428 - +1.3 5,930,436 - +0.0 5,930,663 - PP_5198 0.56 +1.6 5,930,663 - PP_5198 0.56 +0.4 5,930,663 - PP_5198 0.56 +0.3 5,930,663 - PP_5198 0.56 +0.1 5,930,663 - PP_5198 0.56 +2.0 5,930,684 - PP_5198 0.61 -0.5 5,930,714 - PP_5198 0.67 -0.2 5,930,804 - PP_5198 0.86 -1.8 5,930,804 - PP_5198 0.86 +0.3 5,930,804 - PP_5198 0.86 -0.9
Or see this region's nucleotide sequence