Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_11415

Experiment: NLDM_defined_nocarbon with D-Glucose and L-Methionine 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined_nocarbon with D-Glucose and L-Methionine 1 mM
2,450,777	-				-0.8
2,450,875	+				-0.0
2,450,875	+				-1.3
2,450,875	+				-1.3
2,450,875	+				-0.7
2,450,876	-				-1.8
2,450,876	-				-2.9
2,450,887	+				-2.0
2,450,887	+				+0.6
2,450,887	+				+0.5
2,450,887	+				-0.8
2,450,888	-				-0.4
2,450,888	-				-1.0
2,450,888	-				-0.5
2,450,888	-				-0.3
2,450,888	-				+0.7
2,450,888	-				+0.4
2,450,888	-				-0.7
2,451,136	+	ldcA	OKGIIK_11415	0.20	-1.8
2,451,137	-	ldcA	OKGIIK_11415	0.20	+1.0
2,451,137	-	ldcA	OKGIIK_11415	0.20	-2.6
2,451,137	-	ldcA	OKGIIK_11415	0.20	-1.8
2,451,137	-	ldcA	OKGIIK_11415	0.20	-0.6
2,451,137	-	ldcA	OKGIIK_11415	0.20	-1.0
2,451,137	-	ldcA	OKGIIK_11415	0.20	-2.2
2,451,137	-	ldcA	OKGIIK_11415	0.20	-0.0
2,451,137	-	ldcA	OKGIIK_11415	0.20	-0.6
2,451,229	+	ldcA	OKGIIK_11415	0.30	-0.6
2,451,229	+	ldcA	OKGIIK_11415	0.30	+1.4
2,451,229	+	ldcA	OKGIIK_11415	0.30	-1.3
2,451,229	+	ldcA	OKGIIK_11415	0.30	-2.9
2,451,230	-	ldcA	OKGIIK_11415	0.30	-1.3
2,451,230	-	ldcA	OKGIIK_11415	0.30	-0.0
2,451,230	-	ldcA	OKGIIK_11415	0.30	-1.8
2,451,230	-	ldcA	OKGIIK_11415	0.30	-1.0
2,451,230	-	ldcA	OKGIIK_11415	0.30	-0.0
2,451,230	-	ldcA	OKGIIK_11415	0.30	-0.6
2,451,322	+	ldcA	OKGIIK_11415	0.39	-1.3
2,451,322	+	ldcA	OKGIIK_11415	0.39	-1.2
2,451,322	+	ldcA	OKGIIK_11415	0.39	-1.3
2,451,322	+	ldcA	OKGIIK_11415	0.39	-0.0
2,451,322	+	ldcA	OKGIIK_11415	0.39	-1.0
2,451,323	-	ldcA	OKGIIK_11415	0.40	-1.0
2,451,323	-	ldcA	OKGIIK_11415	0.40	-1.3
2,451,323	-	ldcA	OKGIIK_11415	0.40	-1.8
2,451,323	-	ldcA	OKGIIK_11415	0.40	+1.0
2,451,323	-	ldcA	OKGIIK_11415	0.40	-0.0
2,451,625	+	ldcA	OKGIIK_11415	0.72	-2.8
2,451,625	+	ldcA	OKGIIK_11415	0.72	+0.4
2,451,626	-	ldcA	OKGIIK_11415	0.72	-1.3
2,451,626	-	ldcA	OKGIIK_11415	0.72	-2.7
2,451,626	-	ldcA	OKGIIK_11415	0.72	-1.6
2,451,626	-	ldcA	OKGIIK_11415	0.72	-1.6
2,451,626	-	ldcA	OKGIIK_11415	0.72	-0.6
2,451,922	+				+0.7
2,451,922	+				+1.0
2,451,922	+				-0.0
2,451,922	+				+1.4
2,451,922	+				-2.0
2,451,923	-				+0.3
2,451,923	-				+0.6
2,451,923	-				-1.6
2,451,923	-				-0.6
2,451,923	-				+2.6
2,451,923	-				+0.3
2,451,923	-				-0.7
2,451,923	-				-1.4
2,451,923	-				-0.3
2,451,923	-				+0.6
2,451,923	-				-0.8
2,451,985	-				-1.1
2,452,030	+				-0.3
2,452,030	+				+0.7
2,452,030	+				+1.6
2,452,031	-				-1.6
2,452,078	+				+0.4
2,452,078	+				-0.0
2,452,078	+				-1.3
2,452,078	+				-0.0
2,452,078	+				-0.4
2,452,078	+				+1.0
2,452,078	+				+2.0
2,452,078	+				+0.4
2,452,078	+				-0.8
2,452,078	+				+1.4
2,452,078	+				+2.8
2,452,078	+				-0.2
2,452,078	+				-0.0
2,452,078	+				-0.0
2,452,078	+				-0.0
2,452,078	+				-1.6
2,452,079	-				-0.2
2,452,391	+	ribB	OKGIIK_11420	0.29	+0.4
2,452,392	-	ribB	OKGIIK_11420	0.29	-0.0
2,452,392	-	ribB	OKGIIK_11420	0.29	+0.1
2,452,392	-	ribB	OKGIIK_11420	0.29	-0.6
2,452,392	-	ribB	OKGIIK_11420	0.29	-0.6
2,452,392	-	ribB	OKGIIK_11420	0.29	-1.1
2,452,392	-	ribB	OKGIIK_11420	0.29	+0.2
2,452,392	-	ribB	OKGIIK_11420	0.29	-0.4
2,452,392	-	ribB	OKGIIK_11420	0.29	-0.5
2,452,392	-	ribB	OKGIIK_11420	0.29	-1.3
2,452,392	-	ribB	OKGIIK_11420	0.29	+1.0
2,452,392	-	ribB	OKGIIK_11420	0.29	-0.6
2,452,392	-	ribB	OKGIIK_11420	0.29	+0.4
2,452,392	-	ribB	OKGIIK_11420	0.29	-0.1
2,452,392	-	ribB	OKGIIK_11420	0.29	-0.6
2,452,392	-	ribB	OKGIIK_11420	0.29	-2.3
2,452,392	-	ribB	OKGIIK_11420	0.29	-1.2
2,452,392	-	ribB	OKGIIK_11420	0.29	+1.0
2,452,392	-	ribB	OKGIIK_11420	0.29	-1.0
2,452,392	-	ribB	OKGIIK_11420	0.29	-1.2
2,452,457	-	ribB	OKGIIK_11420	0.35	-0.6
2,452,457	-	ribB	OKGIIK_11420	0.35	-0.0
2,452,457	-	ribB	OKGIIK_11420	0.35	+2.1
2,452,457	-	ribB	OKGIIK_11420	0.35	-0.0