Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_11065

Experiment: NLDM_defined_nocarbon with D-Glucose and L-Methionine 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined_nocarbon with D-Glucose and L-Methionine 1 mM
2,372,916	+		OKGIIK_11055	0.85	-0.7
2,372,916	+		OKGIIK_11055	0.85	+1.0
2,372,917	-		OKGIIK_11055	0.85	-0.3
2,373,155	+				+0.1
2,373,156	-				+0.9
2,373,156	-				-0.6
2,373,156	-				+1.2
2,373,176	+				-0.5
2,373,176	+				+0.8
2,373,176	+				-0.4
2,373,176	+				+3.6
2,373,176	+				+0.4
2,373,176	+				-0.6
2,373,176	+				-2.5
2,373,176	+				+1.1
2,373,176	+				-0.0
2,373,176	+				-0.8
2,373,176	+				-0.2
2,373,176	+				-0.3
2,373,176	+				-1.2
2,373,176	+				-1.2
2,373,177	-				-0.6
2,373,177	-				+0.2
2,373,177	-				-1.1
2,373,177	-				+1.0
2,373,177	-				+1.7
2,373,177	-				+0.5
2,373,177	-				+1.5
2,373,177	-				+1.3
2,373,177	-				+0.4
2,373,177	-				+0.4
2,373,177	-				-1.6
2,373,183	+				-1.8
2,373,183	+				-0.0
2,373,184	-				-1.8
2,373,184	-				-1.6
2,373,184	-				-0.0
2,373,184	-				+0.8
2,373,184	-				+1.5
2,373,184	-				-0.2
2,373,211	+				-0.7
2,373,211	+				+0.9
2,373,211	+				+1.0
2,373,211	+				-1.4
2,373,211	+				-0.8
2,373,211	+				+0.6
2,373,211	+				+0.4
2,373,211	+				-0.5
2,373,211	+				-0.7
2,373,211	+				-0.3
2,373,212	-				-0.6
2,373,212	-				-0.0
2,373,212	-				+0.4
2,373,212	-				+0.7
2,373,212	-				-1.8
2,373,212	-				-0.6
2,373,212	-				-0.7
2,373,212	-				-2.3
2,373,212	-				+0.2
2,373,212	-				-1.2
2,373,212	-				-0.3
2,373,212	-				+1.1
2,373,212	-				-1.0
2,373,212	-				+4.2
2,373,212	-				-1.7
2,373,212	-				-0.7
2,373,212	-				+1.0
2,373,212	-				+0.7
2,373,237	+				-0.6
2,373,237	+				+0.0
2,373,237	+				-0.1
2,373,237	+				-0.6
2,373,237	+				-2.9
2,373,238	-				-2.6
2,373,238	-				+0.3
2,373,245	+				+1.0
2,373,245	+				-0.4
2,373,245	+				-1.6
2,373,245	+				+0.4
2,373,245	+				+0.3
2,373,246	-				+1.0
2,373,246	-				-1.3
2,373,246	-				-0.7
2,373,246	-				+2.3
2,373,246	-				-1.4
2,373,246	-				+1.2
2,373,246	-				-0.5
2,373,246	-				-1.6
2,373,246	-				-0.0
2,373,246	-				-1.3
2,373,246	-				-1.3
2,373,246	-				-0.8
2,373,246	-				-1.4
2,373,246	-				-2.2
2,373,246	-				+0.7
2,373,246	-				+2.0
2,373,246	-				-0.6
2,373,574	-	cheW	OKGIIK_11060	0.42	-1.0
2,373,574	-	cheW	OKGIIK_11060	0.42	-1.8
2,373,584	+	cheW	OKGIIK_11060	0.44	-1.8
2,373,584	+	cheW	OKGIIK_11060	0.44	-1.0
2,373,584	+	cheW	OKGIIK_11060	0.44	-1.3
2,373,584	+	cheW	OKGIIK_11060	0.44	+0.2
2,373,584	+	cheW	OKGIIK_11060	0.44	+0.3
2,373,584	+	cheW	OKGIIK_11060	0.44	-0.6
2,373,584	+	cheW	OKGIIK_11060	0.44	-1.6
2,373,584	+	cheW	OKGIIK_11060	0.44	-0.3
2,373,584	+	cheW	OKGIIK_11060	0.44	-1.3
2,373,584	+	cheW	OKGIIK_11060	0.44	+0.3
2,373,584	+	cheW	OKGIIK_11060	0.44	-1.5
2,373,584	+	cheW	OKGIIK_11060	0.44	-1.0
2,373,585	-	cheW	OKGIIK_11060	0.44	+1.1
2,373,585	-	cheW	OKGIIK_11060	0.44	-1.5
2,373,585	-	cheW	OKGIIK_11060	0.44	-2.7
2,373,585	-	cheW	OKGIIK_11060	0.44	+0.8
2,373,585	-	cheW	OKGIIK_11060	0.44	-1.6
2,373,585	-	cheW	OKGIIK_11060	0.44	+3.0
2,373,585	-	cheW	OKGIIK_11060	0.44	-0.6
2,373,585	-	cheW	OKGIIK_11060	0.44	-0.0
2,373,585	-	cheW	OKGIIK_11060	0.44	-0.6
2,373,585	-	cheW	OKGIIK_11060	0.44	-1.3
2,373,585	-	cheW	OKGIIK_11060	0.44	+0.7
2,373,585	-	cheW	OKGIIK_11060	0.44	+1.1
2,373,585	-	cheW	OKGIIK_11060	0.44	+0.2
2,373,811	-	cheW	OKGIIK_11060	0.86	+1.0
2,373,842	+				-2.4
2,373,842	+				-0.4
2,373,842	+				-1.6
2,373,842	+				-1.6
2,373,842	+				-0.6
2,373,842	+				-1.0
2,373,842	+				-2.2
2,373,842	+				-1.0
2,373,843	-				-0.0
2,373,843	-				-0.4
2,373,843	-				-1.3
2,373,843	-				-0.0
2,373,843	-				+0.5
2,374,061	+	ompR	OKGIIK_11065	0.47	-0.0
2,374,062	-	ompR	OKGIIK_11065	0.48	-0.6
2,374,062	-	ompR	OKGIIK_11065	0.48	-0.3
2,374,062	-	ompR	OKGIIK_11065	0.48	-1.3
2,374,062	-	ompR	OKGIIK_11065	0.48	-0.3
2,374,164	+	ompR	OKGIIK_11065	0.75	-1.1
2,374,164	+	ompR	OKGIIK_11065	0.75	+1.0
2,374,164	+	ompR	OKGIIK_11065	0.75	+1.0
2,374,164	+	ompR	OKGIIK_11065	0.75	-0.7
2,374,165	-	ompR	OKGIIK_11065	0.75	-1.0
2,374,165	-	ompR	OKGIIK_11065	0.75	-0.6
2,374,165	-	ompR	OKGIIK_11065	0.75	-1.0
2,374,247	+				-1.6
2,374,247	+				+1.3
2,374,247	+				-2.3
2,374,247	+				-2.3
2,374,247	+				+0.8
2,374,247	+				-0.6
2,374,247	+				-2.3
2,374,247	+				-2.3
2,374,247	+				-0.0
2,374,247	+				+2.6
2,374,247	+				-0.0
2,374,247	+				-2.5
2,374,247	+				+0.2
2,374,247	+				-0.8
2,374,247	+				-1.2
2,374,247	+				-1.6
2,374,247	+				-2.0
2,374,247	+				+0.6
2,374,248	-				-1.3
2,374,248	-				-0.7
2,374,248	-				-0.0
2,374,248	-				-1.3
2,374,248	-				+2.0
2,374,248	-				-1.0
2,374,248	-				-2.5
2,374,248	-				+0.2
2,374,248	-				-2.0
2,374,248	-				-1.8
2,374,248	-				-0.2
2,374,248	-				-1.3
2,374,248	-				+0.3
2,374,355	+	pilG	OKGIIK_11070	0.19	+3.0
2,374,355	+	pilG	OKGIIK_11070	0.19	+1.0
2,374,355	+	pilG	OKGIIK_11070	0.19	+2.0
2,374,355	+	pilG	OKGIIK_11070	0.19	-1.0
2,374,355	+	pilG	OKGIIK_11070	0.19	+0.3
2,374,355	+	pilG	OKGIIK_11070	0.19	-0.6
2,374,355	+	pilG	OKGIIK_11070	0.19	-0.2
2,374,355	+	pilG	OKGIIK_11070	0.19	+3.6
2,374,355	+	pilG	OKGIIK_11070	0.19	-0.6
2,374,356	-	pilG	OKGIIK_11070	0.19	-0.9
2,374,356	-	pilG	OKGIIK_11070	0.19	+2.6
2,374,356	-	pilG	OKGIIK_11070	0.19	-1.4
2,374,356	-	pilG	OKGIIK_11070	0.19	+1.2
2,374,356	-	pilG	OKGIIK_11070	0.19	+0.6
2,374,356	-	pilG	OKGIIK_11070	0.19	-0.5
2,374,356	-	pilG	OKGIIK_11070	0.19	-1.4
2,374,356	-	pilG	OKGIIK_11070	0.19	+0.6
2,374,356	-	pilG	OKGIIK_11070	0.19	+0.3
2,374,356	-	pilG	OKGIIK_11070	0.19	+0.2
2,374,356	-	pilG	OKGIIK_11070	0.19	+2.0
2,374,356	-	pilG	OKGIIK_11070	0.19	-0.2
2,374,356	-	pilG	OKGIIK_11070	0.19	+1.4
2,374,356	-	pilG	OKGIIK_11070	0.19	-1.8
2,374,356	-	pilG	OKGIIK_11070	0.19	+0.1
2,374,476	-	pilG	OKGIIK_11070	0.49	-2.2
2,374,573	+	pilG	OKGIIK_11070	0.74	+2.3
2,374,573	+	pilG	OKGIIK_11070	0.74	+0.3
2,374,573	+	pilG	OKGIIK_11070	0.74	+2.0
2,374,573	+	pilG	OKGIIK_11070	0.74	+1.4
2,374,573	+	pilG	OKGIIK_11070	0.74	+3.6
2,374,573	+	pilG	OKGIIK_11070	0.74	+1.7
2,374,573	+	pilG	OKGIIK_11070	0.74	-1.3
2,374,573	+	pilG	OKGIIK_11070	0.74	+1.0
2,374,573	+	pilG	OKGIIK_11070	0.74	+1.2
2,374,574	-	pilG	OKGIIK_11070	0.74	+0.3
2,374,574	-	pilG	OKGIIK_11070	0.74	-0.9
2,374,574	-	pilG	OKGIIK_11070	0.74	-1.6
2,374,574	-	pilG	OKGIIK_11070	0.74	+1.7
2,374,574	-	pilG	OKGIIK_11070	0.74	+1.2
2,374,574	-	pilG	OKGIIK_11070	0.74	+0.4
2,374,574	-	pilG	OKGIIK_11070	0.74	+0.3
2,374,574	-	pilG	OKGIIK_11070	0.74	+0.6
2,374,574	-	pilG	OKGIIK_11070	0.74	+0.9
2,374,574	-	pilG	OKGIIK_11070	0.74	-0.6
2,374,574	-	pilG	OKGIIK_11070	0.74	-0.3
2,374,668	+				+0.7
2,374,668	+				+0.4
2,374,668	+				+1.0
2,374,668	+				+1.7
2,374,668	+				+1.0
2,374,668	+				+1.7
2,374,668	+				+2.3
2,374,668	+				+1.0
2,374,669	-				-0.3
2,374,669	-				-0.0
2,374,669	-				+0.1
2,374,669	-				+0.7
2,374,669	-				-0.6
2,374,669	-				+1.8
2,374,669	-				+1.0
2,374,669	-				+0.7
2,374,691	+				+1.7
2,374,691	+				+0.3
2,374,691	+				+2.4
2,374,691	+				-0.9
2,374,691	+				-0.9
2,374,691	+				-1.1
2,374,691	+				-1.8
2,374,691	+				-0.8
2,374,691	+				-1.3
2,374,691	+				-1.2
2,374,691	+				+1.3
2,374,691	+				-1.0
2,374,691	+				-2.2
2,374,691	+				+0.1
2,374,691	+				-0.8
2,374,691	+				-0.6
2,374,691	+				-0.0
2,374,692	-				+1.0
2,374,692	-				+0.2
2,374,692	-				-0.6
2,374,692	-				-1.2
2,374,692	-				+0.3
2,374,692	-				+1.0
2,374,692	-				-1.3
2,374,692	-				-0.2
2,374,692	-				-1.0
2,374,692	-				-0.3
2,374,692	-				-0.0
2,374,692	-				+0.5
2,374,723	+				-0.0
2,374,723	+				-0.1
2,374,723	+				+0.4
2,374,723	+				+1.6
2,374,724	-				+1.0
2,374,724	-				+1.6
2,374,724	-				-1.0
2,374,724	-				+2.2
2,374,724	-				-2.3
2,374,724	-				-0.8
2,374,793	+				-0.0
2,374,793	+				+0.4
2,374,793	+				+1.0
2,374,793	+				+2.0
2,374,793	+				+1.0
2,374,793	+				-0.6
2,374,794	-				+0.6
2,374,794	-				-1.0
2,374,794	-				-1.8
2,374,794	-				-0.7
2,374,794	-				-1.0
2,374,833	+				-2.3
2,374,833	+				-0.3
2,374,833	+				-0.6
2,374,834	-				+0.7
2,374,834	-				+1.0
2,374,834	-				+2.0
2,374,863	+				-0.3
2,374,863	+				-0.3
2,374,863	+				+0.8
2,374,863	+				+1.0
2,374,863	+				+0.3
2,374,863	+				-0.7
2,374,863	+				-1.6
2,374,864	-				-0.5
2,374,864	-				+0.7
2,374,864	-				-1.8
2,374,864	-				-0.7
2,374,864	-				-0.6
2,374,864	-				+0.3
2,374,864	-				-0.3
2,374,864	-				-0.1
2,374,864	-				+0.6
2,374,903	+				+0.3
2,374,903	+				-0.4
2,374,903	+				-0.9
2,374,903	+				-0.0
2,374,903	+				+0.7
2,374,903	+				+0.1
2,374,903	+				+2.4
2,374,903	+				-0.6
2,374,903	+				+1.0
2,374,903	+				-0.6
2,374,903	+				-0.0
2,374,904	-				+2.6
2,374,904	-				-2.3
2,374,904	-				-0.6
2,374,904	-				+0.7
2,374,904	-				-1.0
2,374,904	-				-1.3
2,374,963	+				+1.2
2,374,963	+				-0.1
2,374,963	+				-0.7
2,374,963	+				+1.4
2,374,963	+				-2.0
2,374,963	+				-0.6
2,374,963	+				+0.5
2,374,963	+				-1.0
2,374,963	+				-0.6
2,374,964	-				+0.3
2,374,964	-				-0.3
2,374,964	-				+1.0
2,374,964	-				-0.5
2,374,964	-				+1.0
2,374,964	-				-1.3
2,374,964	-				-2.2
2,374,964	-				-1.6
2,374,964	-				-0.6
2,374,964	-				-0.2
2,374,964	-				-0.2
2,374,966	+				+1.4
2,374,966	+				-2.5
2,374,966	+				+2.0
2,374,966	+				-2.0
2,374,966	+				+0.9
2,374,966	+				-1.6
2,374,966	+				+1.6
2,374,966	+				+0.4
2,374,966	+				-0.1
2,374,966	+				+2.8
2,374,966	+				+0.7
2,374,966	+				-0.6
2,374,966	+				-0.4
2,374,966	+				+0.6
2,374,966	+				+1.8
2,374,966	+				+2.3
2,374,966	+				+0.3
2,374,966	+				+1.0
2,374,966	+				-2.2
2,374,966	+				+1.0
2,374,966	+				-1.5
2,374,966	+				+0.4
2,374,966	+				+0.2
2,374,966	+				+0.4
2,374,966	+				-1.0
2,374,966	+				-0.4
2,374,966	+				+0.6
2,374,967	-				+0.5
2,374,967	-				+0.3
2,374,967	-				-0.6
2,374,967	-				-1.0
2,374,967	-				-0.5
2,374,967	-				-1.3
2,374,967	-				-2.6
2,374,967	-				+0.7
2,374,967	-				-1.3
2,374,967	-				+0.5
2,374,967	-				+0.1
2,374,967	-				-0.0
2,374,967	-				+2.3
2,374,967	-				+0.1
2,374,967	-				+1.0
2,374,967	-				+2.2
2,374,967	-				-1.6
2,374,967	-				-2.3
2,374,967	-				-0.0
2,374,967	-				-0.0
2,374,967	-				-1.5
2,374,967	-				-0.5
2,374,967	-				+0.4
2,374,967	-				-0.4
2,374,967	-				+0.5
2,374,967	-				+2.8
2,374,968	+				+0.4
2,374,968	+				-1.3
2,374,968	+				+0.1
2,374,968	+				+1.0
2,374,968	+				+0.4
2,374,968	+				+0.6
2,374,968	+				+1.2
2,374,968	+				-1.0
2,374,968	+				+3.7
2,374,969	-				+2.0
2,374,969	-				+0.6
2,374,969	-				-1.5
2,374,969	-				-0.9
2,374,969	-				-0.6
2,375,002	-				-1.0
2,375,072	+				-3.4
2,375,072	+				-1.8
2,375,073	-				-3.7
2,375,073	-				+0.7
2,375,073	-				-2.2
2,375,073	-				-1.0
2,375,134	+	gshB	OKGIIK_11075	0.11	+1.0
2,375,134	+	gshB	OKGIIK_11075	0.11	-0.6
2,375,134	+	gshB	OKGIIK_11075	0.11	-0.0
2,375,134	+	gshB	OKGIIK_11075	0.11	-2.0
2,375,135	-	gshB	OKGIIK_11075	0.11	+1.0
2,375,135	-	gshB	OKGIIK_11075	0.11	-2.9
2,375,135	-	gshB	OKGIIK_11075	0.11	-3.0
2,375,135	-	gshB	OKGIIK_11075	0.11	-1.0
2,375,135	-	gshB	OKGIIK_11075	0.11	-0.0