Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_07295

Experiment: NLDM_defined_nocarbon with D-Glucose and L-Methionine 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined_nocarbon with D-Glucose and L-Methionine 1 mM
1,611,639	+	lysR	OKGIIK_07285	0.86	+0.0
1,611,639	+	lysR	OKGIIK_07285	0.86	-0.9
1,611,640	-	lysR	OKGIIK_07285	0.86	-1.4
1,611,640	-	lysR	OKGIIK_07285	0.86	+0.3
1,611,785	+				+1.9
1,612,067	+				+1.1
1,612,067	+				-2.3
1,612,067	+				-1.4
1,612,067	+				-1.3
1,612,067	+				+0.6
1,612,067	+				+0.7
1,612,067	+				-1.1
1,612,067	+				-1.1
1,612,067	+				+3.1
1,612,067	+				+0.9
1,612,067	+				-0.7
1,612,068	-				-0.3
1,612,068	-				+0.3
1,612,068	-				+0.7
1,612,068	-				-1.6
1,612,068	-				-0.9
1,612,068	-				+0.1
1,612,088	+				-0.4
1,612,088	+				+0.5
1,612,088	+				+0.6
1,612,088	+				-0.1
1,612,088	+				+0.5
1,612,088	+				-2.1
1,612,089	-				+0.9
1,612,089	-				+0.9
1,612,089	-				+1.1
1,612,089	-				-1.4
1,612,089	-				+1.2
1,612,223	+	greA	OKGIIK_07290	0.34	-0.4
1,612,223	+	greA	OKGIIK_07290	0.34	+0.6
1,612,223	+	greA	OKGIIK_07290	0.34	+0.1
1,612,223	+	greA	OKGIIK_07290	0.34	+0.9
1,612,223	+	greA	OKGIIK_07290	0.34	-0.9
1,612,223	+	greA	OKGIIK_07290	0.34	+0.7
1,612,224	-	greA	OKGIIK_07290	0.34	+1.2
1,612,224	-	greA	OKGIIK_07290	0.34	+0.8
1,612,224	-	greA	OKGIIK_07290	0.34	-0.4
1,612,224	-	greA	OKGIIK_07290	0.34	+1.3
1,612,224	-	greA	OKGIIK_07290	0.34	-0.7
1,612,224	-	greA	OKGIIK_07290	0.34	+0.9
1,612,224	-	greA	OKGIIK_07290	0.34	-1.0
1,612,224	-	greA	OKGIIK_07290	0.34	+2.1
1,612,224	-	greA	OKGIIK_07290	0.34	+1.0
1,612,224	-	greA	OKGIIK_07290	0.34	-0.7
1,612,224	-	greA	OKGIIK_07290	0.34	+2.5
1,612,224	-	greA	OKGIIK_07290	0.34	-0.1
1,612,224	-	greA	OKGIIK_07290	0.34	+0.6
1,612,224	-	greA	OKGIIK_07290	0.34	-0.9
1,612,394	+	greA	OKGIIK_07290	0.70	+2.6
1,612,394	+	greA	OKGIIK_07290	0.70	+0.0
1,612,394	+	greA	OKGIIK_07290	0.70	+0.2
1,612,394	+	greA	OKGIIK_07290	0.70	+0.7
1,612,394	+	greA	OKGIIK_07290	0.70	+1.6
1,612,394	+	greA	OKGIIK_07290	0.70	+0.9
1,612,395	-	greA	OKGIIK_07290	0.70	+2.7
1,612,395	-	greA	OKGIIK_07290	0.70	-0.3
1,612,639	+				-1.7
1,612,640	-				-0.1
1,612,722	-				-0.7
1,612,723	+				-2.1
1,612,724	-				-1.7
1,612,819	+				-0.1
1,613,098	+	carB	OKGIIK_07295	0.18	-0.7
1,613,098	+	carB	OKGIIK_07295	0.18	-1.7
1,613,362	+	carB	OKGIIK_07295	0.26	-1.7
1,613,463	+	carB	OKGIIK_07295	0.29	-0.1
1,613,464	-	carB	OKGIIK_07295	0.29	-1.7
1,613,464	-	carB	OKGIIK_07295	0.29	-0.1
1,613,552	-	carB	OKGIIK_07295	0.32	-1.1
1,613,575	+	carB	OKGIIK_07295	0.32	-3.3
1,613,608	+	carB	OKGIIK_07295	0.33	-0.7
1,613,608	+	carB	OKGIIK_07295	0.33	-2.3
1,613,609	-	carB	OKGIIK_07295	0.33	+0.9
1,613,609	-	carB	OKGIIK_07295	0.33	-1.4
1,613,609	-	carB	OKGIIK_07295	0.33	-1.1
1,613,836	+	carB	OKGIIK_07295	0.40	-2.1
1,613,911	+	carB	OKGIIK_07295	0.43	+0.9
1,613,912	-	carB	OKGIIK_07295	0.43	-1.4
1,613,933	-	carB	OKGIIK_07295	0.43	-1.9
1,614,118	+	carB	OKGIIK_07295	0.49	+0.4
1,614,118	+	carB	OKGIIK_07295	0.49	-1.1
1,614,127	+	carB	OKGIIK_07295	0.49	-0.1
1,614,128	-	carB	OKGIIK_07295	0.49	-2.3
1,614,133	+	carB	OKGIIK_07295	0.50	-1.9
1,614,134	-	carB	OKGIIK_07295	0.50	-2.1
1,614,181	+	carB	OKGIIK_07295	0.51	-1.7
1,614,181	+	carB	OKGIIK_07295	0.51	-0.7
1,614,400	+	carB	OKGIIK_07295	0.58	-0.7
1,614,400	+	carB	OKGIIK_07295	0.58	-1.1
1,614,401	-	carB	OKGIIK_07295	0.58	-1.1
1,614,401	-	carB	OKGIIK_07295	0.58	-3.6
1,614,401	-	carB	OKGIIK_07295	0.58	+0.1
1,614,401	-	carB	OKGIIK_07295	0.58	-0.1
1,614,401	-	carB	OKGIIK_07295	0.58	-0.7
1,614,701	-	carB	OKGIIK_07295	0.67	+0.9
1,614,701	-	carB	OKGIIK_07295	0.67	-1.4
1,614,701	-	carB	OKGIIK_07295	0.67	-1.9
1,614,701	-	carB	OKGIIK_07295	0.67	-1.1
1,614,979	+	carB	OKGIIK_07295	0.76	+0.9
1,615,213	+	carB	OKGIIK_07295	0.83	-1.4
1,615,429	+	carB	OKGIIK_07295	0.90	-1.4
1,615,567	+				-1.7
1,615,567	+				-1.4
1,615,568	-				-1.9
1,615,764	-				-1.4
1,615,764	-				-0.7
1,615,764	-				-1.9
1,615,764	-				-0.4
1,615,805	+				+0.9
1,615,806	-				-0.1
1,615,806	-				-4.4
1,615,806	-				-0.3
1,615,806	-				-0.1
1,615,806	-				-1.7
1,615,806	-				-0.8
1,615,806	-				-1.1
1,615,911	+		OKGIIK_07300	0.13	-2.3
1,615,911	+		OKGIIK_07300	0.13	-0.7
1,615,912	-		OKGIIK_07300	0.13	+2.2
1,616,151	-		OKGIIK_07300	0.34	-1.7
1,616,309	+		OKGIIK_07300	0.48	-1.7
1,616,366	+		OKGIIK_07300	0.54	-1.7
1,616,367	-		OKGIIK_07300	0.54	-0.7
1,616,720	+		OKGIIK_07300	0.85	-0.4
1,616,720	+		OKGIIK_07300	0.85	-1.4
1,616,747	+		OKGIIK_07300	0.87	-1.4
1,616,747	+		OKGIIK_07300	0.87	-1.4