Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_04945

Experiment: NLDM_defined_nocarbon with D-Glucose and L-Methionine 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined_nocarbon with D-Glucose and L-Methionine 1 mM
1,072,354	+		OKGIIK_04935	0.65	+0.3
1,072,354	+		OKGIIK_04935	0.65	+0.8
1,072,354	+		OKGIIK_04935	0.65	+0.4
1,072,355	-		OKGIIK_04935	0.65	-0.2
1,072,369	+		OKGIIK_04935	0.66	-1.5
1,072,369	+		OKGIIK_04935	0.66	+0.3
1,072,369	+		OKGIIK_04935	0.66	+1.8
1,072,369	+		OKGIIK_04935	0.66	+0.4
1,072,370	-		OKGIIK_04935	0.66	+0.8
1,072,370	-		OKGIIK_04935	0.66	-0.9
1,072,370	-		OKGIIK_04935	0.66	+2.1
1,072,370	-		OKGIIK_04935	0.66	+1.2
1,072,433	-		OKGIIK_04935	0.73	+0.7
1,072,457	+		OKGIIK_04935	0.75	-0.3
1,072,492	+		OKGIIK_04935	0.79	-0.2
1,072,492	+		OKGIIK_04935	0.79	-0.3
1,072,492	+		OKGIIK_04935	0.79	-1.0
1,072,492	+		OKGIIK_04935	0.79	+0.3
1,072,492	+		OKGIIK_04935	0.79	+1.3
1,072,492	+		OKGIIK_04935	0.79	-0.8
1,072,492	+		OKGIIK_04935	0.79	+0.2
1,072,493	-		OKGIIK_04935	0.79	+0.5
1,072,493	-		OKGIIK_04935	0.79	-0.8
1,072,493	-		OKGIIK_04935	0.79	-1.8
1,072,493	-		OKGIIK_04935	0.79	+1.4
1,072,493	-		OKGIIK_04935	0.79	-0.2
1,072,493	-		OKGIIK_04935	0.79	+1.4
1,072,493	-		OKGIIK_04935	0.79	-0.2
1,072,493	-		OKGIIK_04935	0.79	-0.1
1,072,493	-		OKGIIK_04935	0.79	-0.4
1,072,493	-		OKGIIK_04935	0.79	-0.6
1,072,493	-		OKGIIK_04935	0.79	-2.8
1,072,493	-		OKGIIK_04935	0.79	+1.1
1,072,493	-		OKGIIK_04935	0.79	-1.2
1,072,493	-		OKGIIK_04935	0.79	+1.8
1,072,493	-		OKGIIK_04935	0.79	-0.2
1,072,493	-		OKGIIK_04935	0.79	+0.3
1,072,534	+		OKGIIK_04935	0.83	-0.9
1,072,534	+		OKGIIK_04935	0.83	-0.0
1,072,534	+		OKGIIK_04935	0.83	-0.2
1,072,534	+		OKGIIK_04935	0.83	-2.3
1,072,535	-		OKGIIK_04935	0.83	-2.9
1,072,535	-		OKGIIK_04935	0.83	-0.5
1,072,535	-		OKGIIK_04935	0.83	+0.5
1,072,535	-		OKGIIK_04935	0.83	-2.0
1,072,690	+				+1.6
1,072,690	+				-1.0
1,072,690	+				+0.4
1,072,691	-				+0.3
1,072,691	-				+0.8
1,072,691	-				-0.8
1,072,691	-				-2.0
1,072,691	-				+0.8
1,072,691	-				+0.4
1,072,691	-				+0.8
1,072,691	-				+0.3
1,072,691	-				-1.7
1,072,691	-				-0.1
1,072,691	-				+1.0
1,072,691	-				+1.3
1,072,835	+				-1.8
1,072,835	+				-1.2
1,072,836	-				-1.7
1,072,912	+				+1.6
1,072,912	+				-2.0
1,072,912	+				+0.3
1,072,912	+				-0.2
1,072,912	+				-1.8
1,072,912	+				-0.4
1,072,913	-				+0.3
1,072,913	-				+0.5
1,072,913	-				-1.5
1,072,913	-				+0.1
1,072,913	-				+0.7
1,072,913	-				+0.3
1,072,962	+				+0.7
1,072,962	+				+1.1
1,072,962	+				-1.5
1,072,962	+				+2.1
1,072,962	+				+0.5
1,072,962	+				-0.8
1,072,962	+				-0.4
1,072,963	-				-2.0
1,072,963	-				+0.1
1,072,963	-				-0.8
1,072,963	-				-1.8
1,072,963	-				-1.2
1,073,159	+	yerC	OKGIIK_04940	0.48	-0.2
1,073,248	+	yerC	OKGIIK_04940	0.74	+1.4
1,073,248	+	yerC	OKGIIK_04940	0.74	+2.2
1,073,249	-	yerC	OKGIIK_04940	0.74	-2.3
1,073,249	-	yerC	OKGIIK_04940	0.74	-0.2
1,073,272	+	yerC	OKGIIK_04940	0.81	+4.0
1,073,272	+	yerC	OKGIIK_04940	0.81	+2.5
1,073,273	-	yerC	OKGIIK_04940	0.82	-2.9
1,073,671	-	hisG	OKGIIK_04945	0.38	-0.8
1,073,671	-	hisG	OKGIIK_04945	0.38	-1.8
1,073,671	-	hisG	OKGIIK_04945	0.38	-1.5
1,073,716	-	hisG	OKGIIK_04945	0.43	-0.8
1,073,716	-	hisG	OKGIIK_04945	0.43	-0.8
1,073,849	+	hisG	OKGIIK_04945	0.58	-0.8
1,074,415	+	hisD	OKGIIK_04950	0.12	-2.2
1,074,415	+	hisD	OKGIIK_04950	0.12	-2.6
1,074,415	+	hisD	OKGIIK_04950	0.12	-0.4
1,074,415	+	hisD	OKGIIK_04950	0.12	+0.8
1,074,415	+	hisD	OKGIIK_04950	0.12	-2.8
1,074,533	+	hisD	OKGIIK_04950	0.22	-1.8
1,074,533	+	hisD	OKGIIK_04950	0.22	-3.5
1,074,533	+	hisD	OKGIIK_04950	0.22	-1.5
1,074,534	-	hisD	OKGIIK_04950	0.22	-1.8
1,074,534	-	hisD	OKGIIK_04950	0.22	-2.3
1,074,534	-	hisD	OKGIIK_04950	0.22	-1.2
1,074,534	-	hisD	OKGIIK_04950	0.22	-3.1
1,074,534	-	hisD	OKGIIK_04950	0.22	-2.9
1,074,534	-	hisD	OKGIIK_04950	0.22	-2.5
1,074,631	+	hisD	OKGIIK_04950	0.29	-1.5
1,074,631	+	hisD	OKGIIK_04950	0.29	-4.2
1,074,631	+	hisD	OKGIIK_04950	0.29	-0.8
1,074,631	+	hisD	OKGIIK_04950	0.29	-3.0
1,074,631	+	hisD	OKGIIK_04950	0.29	-0.8
1,074,631	+	hisD	OKGIIK_04950	0.29	-2.2
1,074,631	+	hisD	OKGIIK_04950	0.29	+0.0
1,074,631	+	hisD	OKGIIK_04950	0.29	-2.6
1,074,631	+	hisD	OKGIIK_04950	0.29	-1.5
1,074,631	+	hisD	OKGIIK_04950	0.29	-1.2
1,074,631	+	hisD	OKGIIK_04950	0.29	-2.6
1,074,631	+	hisD	OKGIIK_04950	0.29	-1.2
1,074,631	+	hisD	OKGIIK_04950	0.29	-2.3
1,074,632	-	hisD	OKGIIK_04950	0.29	-1.5
1,074,632	-	hisD	OKGIIK_04950	0.29	-1.8
1,074,632	-	hisD	OKGIIK_04950	0.29	-2.8
1,074,632	-	hisD	OKGIIK_04950	0.29	-0.2
1,074,632	-	hisD	OKGIIK_04950	0.29	-1.5
1,074,632	-	hisD	OKGIIK_04950	0.29	-0.8
1,074,632	-	hisD	OKGIIK_04950	0.29	-2.0
1,074,632	-	hisD	OKGIIK_04950	0.29	-0.2
1,074,632	-	hisD	OKGIIK_04950	0.29	-3.3
1,074,632	-	hisD	OKGIIK_04950	0.29	-1.2
1,074,632	-	hisD	OKGIIK_04950	0.29	-1.5
1,074,632	-	hisD	OKGIIK_04950	0.29	-1.8
1,074,766	+	hisD	OKGIIK_04950	0.39	-2.6
1,074,766	+	hisD	OKGIIK_04950	0.39	-2.3
1,074,766	+	hisD	OKGIIK_04950	0.39	-1.5
1,074,767	-	hisD	OKGIIK_04950	0.40	-1.8
1,074,767	-	hisD	OKGIIK_04950	0.40	-3.2
1,074,767	-	hisD	OKGIIK_04950	0.40	-0.8
1,074,767	-	hisD	OKGIIK_04950	0.40	-3.1
1,074,767	-	hisD	OKGIIK_04950	0.40	-0.2
1,074,767	-	hisD	OKGIIK_04950	0.40	-3.0
1,074,767	-	hisD	OKGIIK_04950	0.40	+0.2
1,074,767	-	hisD	OKGIIK_04950	0.40	-2.2
1,074,838	+	hisD	OKGIIK_04950	0.45	-3.3
1,074,839	-	hisD	OKGIIK_04950	0.45	-2.2
1,074,839	-	hisD	OKGIIK_04950	0.45	-1.2
1,074,839	-	hisD	OKGIIK_04950	0.45	-1.5
1,074,839	-	hisD	OKGIIK_04950	0.45	-2.8