Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_04805

Experiment: NLDM_defined_nocarbon with D-Glucose and L-Methionine 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined_nocarbon with D-Glucose and L-Methionine 1 mM
1,044,043	+	prmB	OKGIIK_04795	0.65	-0.2
1,044,043	+	prmB	OKGIIK_04795	0.65	-1.4
1,044,043	+	prmB	OKGIIK_04795	0.65	-0.8
1,044,043	+	prmB	OKGIIK_04795	0.65	+0.8
1,044,043	+	prmB	OKGIIK_04795	0.65	-0.7
1,044,043	+	prmB	OKGIIK_04795	0.65	-0.1
1,044,043	+	prmB	OKGIIK_04795	0.65	-1.5
1,044,043	+	prmB	OKGIIK_04795	0.65	+0.2
1,044,043	+	prmB	OKGIIK_04795	0.65	+0.8
1,044,044	-	prmB	OKGIIK_04795	0.65	-0.3
1,044,044	-	prmB	OKGIIK_04795	0.65	-0.3
1,044,061	+	prmB	OKGIIK_04795	0.67	-0.8
1,044,062	-	prmB	OKGIIK_04795	0.67	+0.4
1,044,082	+	prmB	OKGIIK_04795	0.70	+0.4
1,044,082	+	prmB	OKGIIK_04795	0.70	-0.0
1,044,463	+	rimL	OKGIIK_04800	0.18	+2.1
1,044,464	-	rimL	OKGIIK_04800	0.18	+2.4
1,044,464	-	rimL	OKGIIK_04800	0.18	+0.5
1,044,486	+	rimL	OKGIIK_04800	0.22	-0.2
1,044,902	-				-1.3
1,044,902	-				-1.0
1,045,002	+				+1.8
1,045,002	+				+0.8
1,045,002	+				+1.8
1,045,002	+				-0.8
1,045,002	+				+2.8
1,045,002	+				-0.8
1,045,016	+				-1.6
1,045,017	-				+0.1
1,045,362	+	aroC	OKGIIK_04805	0.30	+0.8
1,045,362	+	aroC	OKGIIK_04805	0.30	-2.2
1,045,362	+	aroC	OKGIIK_04805	0.30	-3.9
1,045,362	+	aroC	OKGIIK_04805	0.30	-1.5
1,045,362	+	aroC	OKGIIK_04805	0.30	+0.8
1,045,362	+	aroC	OKGIIK_04805	0.30	-1.2
1,045,363	-	aroC	OKGIIK_04805	0.30	+0.8
1,045,363	-	aroC	OKGIIK_04805	0.30	-1.2
1,045,363	-	aroC	OKGIIK_04805	0.30	-3.2
1,045,374	+	aroC	OKGIIK_04805	0.31	-1.6
1,045,374	+	aroC	OKGIIK_04805	0.31	-1.3
1,045,374	+	aroC	OKGIIK_04805	0.31	-3.1
1,045,374	+	aroC	OKGIIK_04805	0.31	-0.8
1,045,375	-	aroC	OKGIIK_04805	0.31	-2.8
1,045,605	+	aroC	OKGIIK_04805	0.53	-3.2
1,045,605	+	aroC	OKGIIK_04805	0.53	-0.8
1,045,605	+	aroC	OKGIIK_04805	0.53	-1.2
1,045,605	+	aroC	OKGIIK_04805	0.53	-2.2
1,045,606	-	aroC	OKGIIK_04805	0.53	-2.0
1,045,606	-	aroC	OKGIIK_04805	0.53	-1.2
1,045,606	-	aroC	OKGIIK_04805	0.53	-0.2
1,045,606	-	aroC	OKGIIK_04805	0.53	-1.2
1,045,699	-	aroC	OKGIIK_04805	0.61	-1.5
1,045,821	+	aroC	OKGIIK_04805	0.72	-3.2
1,045,835	+	aroC	OKGIIK_04805	0.74	-1.8
1,046,390	-		OKGIIK_04810	0.24	+0.1
1,046,476	+		OKGIIK_04810	0.33	+2.4
1,046,476	+		OKGIIK_04810	0.33	-0.2
1,046,477	-		OKGIIK_04810	0.33	-1.8
1,046,477	-		OKGIIK_04810	0.33	-1.5
1,046,598	+		OKGIIK_04810	0.45	-0.8
1,046,598	+		OKGIIK_04810	0.45	-2.2
1,046,599	-		OKGIIK_04810	0.45	-0.4
1,046,599	-		OKGIIK_04810	0.45	+0.1
1,046,677	+		OKGIIK_04810	0.53	+0.1
1,046,677	+		OKGIIK_04810	0.53	-0.8
1,046,677	+		OKGIIK_04810	0.53	+0.4
1,046,677	+		OKGIIK_04810	0.53	+1.4
1,046,677	+		OKGIIK_04810	0.53	+0.8
1,046,677	+		OKGIIK_04810	0.53	-0.6
1,046,677	+		OKGIIK_04810	0.53	+1.4
1,046,677	+		OKGIIK_04810	0.53	+0.8
1,046,677	+		OKGIIK_04810	0.53	-0.4
1,046,677	+		OKGIIK_04810	0.53	-1.2
1,046,678	-		OKGIIK_04810	0.53	-1.4
1,046,678	-		OKGIIK_04810	0.53	+0.3
1,046,678	-		OKGIIK_04810	0.53	-2.2
1,046,678	-		OKGIIK_04810	0.53	-1.7
1,046,968	+		OKGIIK_04810	0.82	-0.6
1,046,968	+		OKGIIK_04810	0.82	+1.5
1,046,969	-		OKGIIK_04810	0.82	-0.5
1,046,969	-		OKGIIK_04810	0.82	-0.5
1,046,969	-		OKGIIK_04810	0.82	-1.5
1,047,013	-		OKGIIK_04810	0.86	-0.8
1,047,013	-		OKGIIK_04810	0.86	-2.0
1,047,013	-		OKGIIK_04810	0.86	-0.2