Experiment: Community=guar; Passage=4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF5926 and GFF5927 are separated by 3 nucleotides GFF5927 and GFF5928 overlap by 4 nucleotides
GFF5926 - FIG00957260: hypothetical protein, at 141,066 to 142,196
GFF5926
GFF5927 - 3-oxoacyl-[ACP] synthase, at 142,200 to 143,237
GFF5927
GFF5928 - hypothetical protein, at 143,234 to 144,346
GFF5928
Position (kb) 142
143
144 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 141.294 kb on - strand, within GFF5926 at 141.541 kb on + strand, within GFF5926 at 141.542 kb on - strand, within GFF5926 at 141.691 kb on + strand, within GFF5926 at 141.691 kb on + strand, within GFF5926 at 141.691 kb on + strand, within GFF5926 at 141.691 kb on + strand, within GFF5926 at 141.692 kb on - strand, within GFF5926 at 141.890 kb on - strand, within GFF5926 at 141.890 kb on - strand, within GFF5926 at 141.971 kb on - strand, within GFF5926 at 142.447 kb on + strand, within GFF5927 at 142.447 kb on + strand, within GFF5927 at 142.448 kb on - strand, within GFF5927 at 143.620 kb on - strand, within GFF5928 at 143.620 kb on - strand, within GFF5928 at 143.679 kb on + strand, within GFF5928 at 143.679 kb on + strand, within GFF5928 at 143.745 kb on + strand, within GFF5928 at 143.745 kb on + strand, within GFF5928 at 143.745 kb on + strand, within GFF5928 at 143.745 kb on + strand, within GFF5928 at 143.746 kb on - strand, within GFF5928 at 143.749 kb on + strand, within GFF5928 at 143.865 kb on + strand, within GFF5928 at 143.865 kb on + strand, within GFF5928 at 143.865 kb on + strand, within GFF5928 at 143.865 kb on + strand, within GFF5928 at 143.866 kb on - strand, within GFF5928 at 143.866 kb on - strand, within GFF5928 at 143.866 kb on - strand, within GFF5928 at 143.866 kb on - strand, within GFF5928 at 143.926 kb on - strand, within GFF5928 at 144.022 kb on - strand, within GFF5928 at 144.132 kb on + strand, within GFF5928 at 144.132 kb on + strand, within GFF5928 at 144.132 kb on + strand, within GFF5928 at 144.132 kb on + strand, within GFF5928 at 144.133 kb on - strand, within GFF5928 at 144.133 kb on - strand, within GFF5928 at 144.133 kb on - strand, within GFF5928
Per-strain Table
Position Strand Gene LocusTag Fraction Community=guar; Passage=4 remove 141,294 - GFF5926 0.20 +1.5 141,541 + GFF5926 0.42 +0.1 141,542 - GFF5926 0.42 -1.6 141,691 + GFF5926 0.55 -0.2 141,691 + GFF5926 0.55 -0.7 141,691 + GFF5926 0.55 -0.6 141,691 + GFF5926 0.55 +1.3 141,692 - GFF5926 0.55 -0.2 141,890 - GFF5926 0.73 -1.2 141,890 - GFF5926 0.73 -3.2 141,971 - GFF5926 0.80 +0.5 142,447 + GFF5927 0.24 -1.8 142,447 + GFF5927 0.24 -3.1 142,448 - GFF5927 0.24 -2.3 143,620 - GFF5928 0.35 +0.4 143,620 - GFF5928 0.35 +0.1 143,679 + GFF5928 0.40 +1.8 143,679 + GFF5928 0.40 -0.7 143,745 + GFF5928 0.46 +0.1 143,745 + GFF5928 0.46 -0.6 143,745 + GFF5928 0.46 -1.6 143,745 + GFF5928 0.46 -1.1 143,746 - GFF5928 0.46 -0.2 143,749 + GFF5928 0.46 -0.3 143,865 + GFF5928 0.57 +1.3 143,865 + GFF5928 0.57 +0.5 143,865 + GFF5928 0.57 +1.6 143,865 + GFF5928 0.57 -3.1 143,866 - GFF5928 0.57 -1.9 143,866 - GFF5928 0.57 +0.4 143,866 - GFF5928 0.57 -2.1 143,866 - GFF5928 0.57 +0.7 143,926 - GFF5928 0.62 +0.2 144,022 - GFF5928 0.71 -1.2 144,132 + GFF5928 0.81 +0.6 144,132 + GFF5928 0.81 -1.1 144,132 + GFF5928 0.81 +0.5 144,132 + GFF5928 0.81 -3.2 144,133 - GFF5928 0.81 -1.3 144,133 - GFF5928 0.81 +2.0 144,133 - GFF5928 0.81 -1.6
Or see this region's nucleotide sequence